RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 HOXD11P31277 338 aaPredicted RBP26.23■■□□□ 1.79
USP48-214ENST00000532737 SLC5A3P53794 718 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 CYP4F8P98187 520 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 PDE4CQ08493 712 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 IFRD2Q12894 506 aaPredicted RBP26.23■■□□□ 1.79
USP48-214ENST00000532737 PKDCCQ504Y2 493 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 STXBP5Q5T5C0 1151 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 ZSWIM3Q96MP5 696 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 NLRC4Q9NPP4 1024 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 GDE1Q9NZC3 331 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 IL37Q9NZH6 218 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 HESX1Q9UBX0 185 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 ZFP37Q9Y6Q3 630 aaPredicted RBP26.23■■□□□ 1.79
USP48-214ENST00000532737 TULP2O00295 520 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 RTN3O95197 1032 aaPredicted RBP26.22■■□□□ 1.79
USP48-214ENST00000532737 YWHAQP27348 245 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 GNA15P30679 374 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 CLCN1P35523 988 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 UBASH3AP57075 661 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 ST13P5Q8NFI4 369 aaPredicted RBP26.22■■□□□ 1.79
USP48-214ENST00000532737 ZNF606Q8WXB4 792 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 GCNAQ96QF7 691 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 UBXN6Q9BZV1 441 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 PNPLA8Q9NP80 782 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 EHD2Q9NZN4 543 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 DOCK8Q8NF50 2099 aa26.22■■□□□ 1.79
USP48-214ENST00000532737 A0A1W2PQC6 194 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 F8VZ95 297 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 BCAT1P54687 386 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 TAF10Q12962 218 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 STILQ15468 1287 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 GPR158Q5T848 1215 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 PIGZQ86VD9 579 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 COMMD8Q9NX08 183 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 DAAM1Q9Y4D1 1078 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 ZNF318Q5VUA4 2279 aa26.21■■□□□ 1.79
USP48-214ENST00000532737 THAP12O43422 761 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 DCXO43602 365 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 CFHP08603 1231 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 JAM2P57087 298 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 PTK2Q05397 1052 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 BST2Q10589 180 aaKnown RBP26.2■■□□□ 1.78
USP48-214ENST00000532737 ARHGAP15Q53QZ3 475 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 SLC47A2Q86VL8 602 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 RNF135Q8IUD6 432 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 IFNKQ9P0W0 207 aa26.2■■□□□ 1.78
USP48-214ENST00000532737 FAM92AA1XBS5 289 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 ANHXE9PGG2 379 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 M0QYV0 167 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 XPO1O14980 1071 aaKnown RBP26.19■■□□□ 1.78
USP48-214ENST00000532737 ASGR2P07307 311 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 SLC8A3P57103 927 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 FAM78AQ5JUQ0 283 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 DENND1BQ6P3S1 775 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 MRPS31Q92665 395 aaKnown RBP26.19■■□□□ 1.78
USP48-214ENST00000532737 SECISBP2LQ93073 1101 aaKnown RBP26.19■■□□□ 1.78
USP48-214ENST00000532737 FBXO32Q969P5 355 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 SLC46A2Q9BY10 475 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 SLITRK6Q9H5Y7 841 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 TASP1Q9H6P5 420 aa26.19■■□□□ 1.78
USP48-214ENST00000532737 GREB1Q4ZG55 1949 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 PIEZO1Q92508 2521 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 SETSIPP0DME0 302 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 KIF11P52732 1056 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 TXNDC8Q6A555 127 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 PARM1Q6UWI2 310 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 GAS2L3Q86XJ1 694 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 ZSCAN18Q8TBC5 510 aaPredicted RBP26.18■■□□□ 1.78
USP48-214ENST00000532737 SLC35F5Q8WV83 523 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 RSAD2Q8WXG1 361 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 SLITRK1Q96PX8 696 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 TRPM5Q9NZQ8 1165 aa26.18■■□□□ 1.78
USP48-214ENST00000532737 CHORDC1Q9UHD1 332 aaPredicted RBP26.18■■□□□ 1.78
USP48-214ENST00000532737 ZNF840PA6NDX5 716 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 MED7O43513 233 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 PBX1P40424 430 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 PLA2G4AP47712 749 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 BPIFB4P59827 614 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 HTR4Q13639 388 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 MON1AQ86VX9 555 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 GPIHBP1Q8IV16 184 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 FGF14Q92915 247 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 ASB16Q96NS5 453 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 SPAG5Q96R06 1193 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 RPP25Q9BUL9 199 aaKnown RBP26.17■■□□□ 1.78
USP48-214ENST00000532737 RBSNQ9H1K0 784 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 FBXO44Q9H4M3 255 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 KCNK12Q9HB15 430 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 GMIPQ9P107 970 aa26.17■■□□□ 1.78
USP48-214ENST00000532737 GABBR2O75899 941 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 GFPT2O94808 682 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 SOX5P35711 763 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 STAT1P42224 750 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 PGFP49763 221 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 RAB41Q5JT25 222 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 PMF1Q6P1K2 205 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 MAB21L3Q8N8X9 362 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 SMARCD2Q92925 531 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 XPO4Q9C0E2 1151 aaKnown RBP26.16■■□□□ 1.78
USP48-214ENST00000532737 SCML2Q9UQR0 700 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms