RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 HDCP19113 662 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 MCCD1P59942 119 aaPredicted RBP18.92■□□□□ 0.62
SMG1-203ENST00000532700 SRSF5Q13243 272 aaKnown RBP18.92■□□□□ 0.62
SMG1-203ENST00000532700 ADAM9Q13443 819 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 SGSM1Q2NKQ1 1148 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 TMEM196Q5HYL7 178 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 SLC2A14Q8TDB8 520 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 OSCP1Q8WVF1 389 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 ZSCAN32Q9NX65 697 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 SMPD4Q9NXE4 827 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 ZMYM5Q9UJ78 669 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 PCDHA5Q9Y5H7 936 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 MYOFQ9NZM1 2061 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 GPR179Q6PRD1 2367 aa18.92■□□□□ 0.62
SMG1-203ENST00000532700 CD44P16070 742 aaKnown RBP18.91■□□□□ 0.62
SMG1-203ENST00000532700 GJA4P35212 333 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 MESP2Q0VG99 397 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 ISM2Q6H9L7 571 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 MAMSTRQ6ZN01 415 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 MSANTD3Q96H12 275 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 ZFRQ96KR1 1074 aaKnown RBP18.91■□□□□ 0.62
SMG1-203ENST00000532700 ARID3AQ99856 593 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 MED10Q9BTT4 135 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 ECT2Q9H8V3 914 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 DUS2Q9NX74 493 aaKnown RBP18.91■□□□□ 0.62
SMG1-203ENST00000532700 TRPM5Q9NZQ8 1165 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 ARHGAP26Q9UNA1 814 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 PCDHGA2Q9Y5H1 932 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 DCHS1Q96JQ0 3298 aa18.91■□□□□ 0.62
SMG1-203ENST00000532700 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 CHURC1-FNTBB4DL54 471 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 LEFTY2O00292 366 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 KINO60870 393 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 AP1G2O75843 785 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 ABL1P00519 1130 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 ADORA2BP29275 332 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 PSMC2P35998 433 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 FNTBP49356 437 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 SLC5A3P53794 718 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 INCA1Q0VD86 236 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 EDRF1Q3B7T1 1238 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 ANKRD40Q6AI12 368 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 ZC3H14Q6PJT7 736 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 INTS8Q75QN2 995 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 SFTPA1Q8IWL2 248 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 ZC3H3Q8IXZ2 948 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 CRYBG2Q8N1P7 616 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 SPEM1Q8N4L4 309 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 CCDC47Q96A33 483 aaKnown RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 CCSER2Q9H7U1 834 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 IL37Q9NZH6 218 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 GMIPQ9P107 970 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 CHORDC1Q9UHD1 332 aaPredicted RBP18.9■□□□□ 0.62
SMG1-203ENST00000532700 CPQQ9Y646 472 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 DMXL1Q9Y485 3027 aa18.9■□□□□ 0.62
SMG1-203ENST00000532700 HHLA1C9JL84 531 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
SMG1-203ENST00000532700 TCF3P15923 654 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CD58P19256 250 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 BMP6P22004 513 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CXCL12P48061 93 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 GALK1P51570 392 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 SLC7A9P82251 487 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 LRRC32Q14392 662 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 LPAL2Q16609 132 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CBWD6Q4V339 395 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CBWD3Q5JTY5 395 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CBWD5Q5RIA9 395 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 HEATR6Q6AI08 1181 aaKnown RBP18.89■□□□□ 0.61
SMG1-203ENST00000532700 CC2D1AQ6P1N0 951 aaPredicted RBP18.89■□□□□ 0.61
SMG1-203ENST00000532700 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 TAF4BQ92750 862 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 FBXO32Q969P5 355 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 SMARCD1Q96GM5 515 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 CEP295NLQ96MC4 621 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 EPC1Q9H2F5 836 aa18.89■□□□□ 0.61
SMG1-203ENST00000532700 DMAP1Q9NPF5 467 aaPredicted RBP18.89■□□□□ 0.61
SMG1-203ENST00000532700 SMG5Q9UPR3 1016 aaKnown RBP18.89■□□□□ 0.61
SMG1-203ENST00000532700 COCHO43405 550 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 KIF20AO95235 890 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 YWHAQP27348 245 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 OPRD1P41143 372 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 PXNP49023 591 aaPredicted RBP18.88■□□□□ 0.61
SMG1-203ENST00000532700 CCR3P51677 355 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 MAP3K7CLP57077 242 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 PDGFRLQ15198 375 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 DGKKQ5KSL6 1271 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 ZNF658Q5TYW1 1059 aaPredicted RBP18.88■□□□□ 0.61
SMG1-203ENST00000532700 CLEC20AQ6ZU45 233 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 FILIP1Q7Z7B0 1213 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 KIAA2013Q8IYS2 634 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 ATRIPQ8WXE1 791 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 TATDN2Q93075 761 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 TNIP3Q96KP6 325 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 SEMA4AQ9H3S1 761 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 TMEM8AQ9HCN3 771 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 CSNK1G1Q9HCP0 422 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms