RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 BEST1O76090 585 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 RETP07949 1114 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDHD-213ENST00000532699 CMA1P23946 247 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 NDUFA8P51970 172 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 SLC7A9P82251 487 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 TAF10Q12962 218 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 ORC1Q13415 861 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 IL37Q9NZH6 218 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
SDHD-213ENST00000532699 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
SDHD-213ENST00000532699 A8MXQ7 604 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 TRIM66O15016 1216 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 CYP17A1P05093 508 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 ATICP31939 592 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 ASPAP45381 313 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 TNNC1P63316 161 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SDHD-213ENST00000532699 NCOA4Q13772 614 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
SDHD-213ENST00000532699 ZACNQ401N2 412 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 CC2D1AQ6P1N0 951 aaPredicted RBP13.33□□□□□ -0.28
SDHD-213ENST00000532699 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 HHIPQ96QV1 700 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 SMOQ99835 787 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
SDHD-213ENST00000532699 RXFP3Q9NSD7 469 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
SDHD-213ENST00000532699 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 PCNX2A6NKB5 2137 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 NR3C1P04150 777 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 ZDHHC11BP0C7U3 371 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 DRD1P21728 446 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CNR2P34972 360 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 SLC6A11P48066 632 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 IFNAR2P48551 515 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 DPYDQ12882 1025 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 KCNB1Q14721 858 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CCDC6Q16204 474 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 ZNF699Q32M78 642 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 GPRIN1Q7Z2K8 1008 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 ADGRG2Q8IZP9 1017 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CD101Q93033 1021 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 ATP2A3Q93084 1043 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
SDHD-213ENST00000532699 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDHD-213ENST00000532699 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 SMPD4Q9NXE4 827 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 TRPM5Q9NZQ8 1165 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 GMEB2Q9UKD1 530 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 CPQQ9Y646 472 aa13.32□□□□□ -0.28
SDHD-213ENST00000532699 DCDC2BA2VCK2 349 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 PDXKO00764 312 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 DCLK1O15075 740 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 COCHO43405 550 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
SDHD-213ENST00000532699 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
SDHD-213ENST00000532699 CCDC130P13994 396 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 PFKLP17858 780 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 ANXA13P27216 316 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 MCCD1P59942 119 aaPredicted RBP13.31□□□□□ -0.28
SDHD-213ENST00000532699 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
SDHD-213ENST00000532699 PSMD2Q13200 908 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 BIRC3Q13489 604 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 TRPC3Q13507 836 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 RHBDF2Q6PJF5 856 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 ACOT1Q86TX2 421 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
SDHD-213ENST00000532699 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 FSIP1Q8NA03 581 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 USP33Q8TEY7 942 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 WHAMMQ8TF30 809 aa13.31□□□□□ -0.28
SDHD-213ENST00000532699 SMOC1Q9H4F8 434 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms