RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 HAO1Q9UJM8 370 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 SPEF1Q9Y4P9 236 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 CD3EAPO15446 510 aaKnown RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 CLDN3O15551 220 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 PLOD3O60568 738 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 LDLRP01130 860 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 ATP1A1P05023 1023 aaKnown RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 ANXA6P08133 673 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 SCTRP47872 440 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 OMPP47874 163 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 KPNA1P52294 538 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 POLD3Q15054 466 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 ARL6IP4Q66PJ3 421 aaKnown RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 LLGL2Q6P1M3 1020 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 PDXDC2PQ6P474 469 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 DHRSXQ8N5I4 330 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 LRRC1Q9BTT6 524 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 UNKQ9C0B0 810 aaKnown RBP8.39□□□□□ -1.07
CTNND1-231ENST00000532463 TBC1D24Q9ULP9 559 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 ADCY9O60503 1353 aa8.39□□□□□ -1.07
CTNND1-231ENST00000532463 CLRN2A0PK11 232 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PDHA2P29803 388 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 HOXC8P31273 242 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 CEBPGP53567 150 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GRIK3Q13003 919 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ZFP69Q49AA0 526 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TNFAIP8L3Q5GJ75 292 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 AGAP9Q5VTM2 703 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 UNC13DQ70J99 1090 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 C9orf16Q9BUW7 83 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SHCBP1LQ9BZQ2 653 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PAK5Q9P286 719 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PHTF1Q9UMS5 762 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SNX9Q9Y5X1 595 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 H3BN98 237 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PTPN4P29074 926 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SLC34A1Q06495 639 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 FAM83BQ5T0W9 1011 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ATPAF2Q8N5M1 289 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SMYD1Q8NB12 490 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TRPV1Q8NER1 839 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 C9orf72Q96LT7 481 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 NSMCE2Q96MF7 247 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TMEM165Q9HC07 324 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 FAM50BQ9Y247 325 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GIT1Q9Y2X7 761 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 CARMIL3Q8ND23 1372 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GLRA3O75311 464 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ULK1O75385 1050 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TAF5LO75529 589 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ATP1A3P13637 1013 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 CHRM3P20309 590 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GPC3P51654 580 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 IST1P53990 364 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 VEPH1Q14D04 833 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ZFP1Q6P2D0 407 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 STOX1Q6ZVD7 989 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SMIM5Q71RC9 77 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GRPEL2Q8TAA5 225 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GATAD2BQ8WXI9 593 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 DCAF5Q96JK2 942 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 AGAP3Q96P47 875 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 KATNAL1Q9BW62 490 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ARHGAP28Q9P2N2 729 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 GRIP1Q9Y3R0 1128 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 TELO2Q9Y4R8 837 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ARPC4-TTLL3A0A0A6YYG9 625 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 A0A0D9SFI3 127 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 MGAT4DA6NG13 374 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 HSD3B1P14060 373 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SEC24CP53992 1094 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 DDX39BQ13838 428 aaKnown RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 KDELC2Q7Z4H8 507 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PSMA8Q8TAA3 256 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 FAM213AQ9BRX8 229 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 RPS6KA6Q9UK32 745 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PADI4Q9UM07 663 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SLC9A8Q9Y2E8 581 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 INSRP06213 1382 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ZC3H4Q9UPT8 1303 aaKnown RBP8.38□□□□□ -1.07
CTNND1-231ENST00000532463 LOC100506127A0A0U1RQW1 187 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 CCDC189A1A4V9 331 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 PTGES3LE9PB15 166 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ATP6V1G2O95670 118 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 SERPINA1P01009 418 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 NR3C1P04150 777 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 MAGEA4P43358 317 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 ABCB5Q2M3G0 1257 aa8.38□□□□□ -1.07
CTNND1-231ENST00000532463 CCNI2Q6ZMN8 369 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms