RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 DENND5BQ6ZUT9 1274 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 NUP93Q8N1F7 819 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 SIX6OS1Q8N1H7 587 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 SCAMP5Q8TAC9 235 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 HSFY1Q96LI6 401 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 DESI2Q9BSY9 194 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 MYO7AQ13402 2215 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 EIF3CLB5ME19 914 aaKnown RBP18.6■□□□□ 0.57
CTSB-222ENST00000531551 HHLA1C9JL84 531 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 CCL16O15467 120 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 PLD1Q13393 1074 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 ACRBPQ8NEB7 543 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 STK32AQ8WU08 396 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 MYLIPQ8WY64 445 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 EIF3CQ99613 913 aaKnown RBP18.6■□□□□ 0.57
CTSB-222ENST00000531551 UBXN6Q9BZV1 441 aa18.6■□□□□ 0.57
CTSB-222ENST00000531551 SLC38A8A6NNN8 435 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 ZNF263O14978 683 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 ERBB2P04626 1255 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 MMP8P22894 467 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 MAGEA1P43355 309 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 ACADSBP45954 432 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 TOGARAM2Q6ZUX3 1019 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 SCUBE3Q8IX30 993 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 DEFB123Q8N688 67 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 VN1R2Q8NFZ6 395 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 KCTD13Q8WZ19 329 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 C18orf8Q96DM3 657 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 SPATA17Q96L03 361 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 SLC4A5Q9BY07 1137 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 PNPLA8Q9NP80 782 aa18.59■□□□□ 0.57
CTSB-222ENST00000531551 TNFRSF10BO14763 440 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 LINC01565O15544 149 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 ZMYND10O75800 440 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 C1RP00736 705 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 SNX16P57768 344 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 USP46P62068 366 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 OR6B2Q6IFH4 312 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 PPP1R2P3Q6NXS1 205 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 PHF13Q86YI8 300 aaPredicted RBP18.58■□□□□ 0.57
CTSB-222ENST00000531551 MCOLN2Q8IZK6 566 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 ELMOD1Q8N336 334 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 CASP10Q92851 521 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 PACSIN1Q9BY11 444 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 ULBP1Q9BZM6 244 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 ISCUQ9H1K1 167 aa18.58■□□□□ 0.57
CTSB-222ENST00000531551 GABBR2O75899 941 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 USP17L7P0C7H9 530 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 GPR153Q6NV75 609 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 MON1BQ7L1V2 547 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 TMEM110Q86TL2 294 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 C12orf76Q8N812 135 aaPredicted RBP18.58■□□□□ 0.56
CTSB-222ENST00000531551 CLEC4CQ8WTT0 213 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 HDAC7Q8WUI4 952 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 NDRG1Q92597 394 aaKnown RBP18.58■□□□□ 0.56
CTSB-222ENST00000531551 ZNF653Q96CK0 615 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
CTSB-222ENST00000531551 ZNF512Q96ME7 567 aaPredicted RBP18.58■□□□□ 0.56
CTSB-222ENST00000531551 CDX2Q99626 313 aaPredicted RBP18.58■□□□□ 0.56
CTSB-222ENST00000531551 MYO1AQ9UBC5 1043 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 PCDHA13Q9Y5I0 950 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 MYO9BQ13459 2157 aa18.58■□□□□ 0.56
CTSB-222ENST00000531551 GOLGA8SH3BPF8 625 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 ATMINO43313 823 aaPredicted RBP18.57■□□□□ 0.56
CTSB-222ENST00000531551 CALB1P05937 261 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 H2AFZP0C0S5 128 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 CSH1P0DML2 217 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 CSH2P0DML3 217 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 GALCP54803 685 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CTSB-222ENST00000531551 RAB41Q5JT25 222 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 FAM183BPQ6ZVS7 135 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 H2AFVQ71UI9 128 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 DNAJB7Q7Z6W7 309 aaPredicted RBP18.57■□□□□ 0.56
CTSB-222ENST00000531551 ITIH5Q86UX2 942 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 EFHBQ8N7U6 833 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 APOL5Q9BWW9 433 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
CTSB-222ENST00000531551 CHORDC1Q9UHD1 332 aaPredicted RBP18.57■□□□□ 0.56
CTSB-222ENST00000531551 NENFQ9UMX5 172 aa18.57■□□□□ 0.56
CTSB-222ENST00000531551 CCDC195A0A1B0GUA6 201 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 PAPSS1O43252 624 aaPredicted RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 RTN3O95197 1032 aaPredicted RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 LCA5LO95447 670 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 POU3F3P20264 500 aaPredicted RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 YWHAQP27348 245 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 KRT83P78385 493 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 TMC5Q6UXY8 1006 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 THAP2Q9H0W7 228 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 FBXO44Q9H4M3 255 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CYLDQ9NQC7 956 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CLDND1Q9NY35 253 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 STRIP2Q9ULQ0 834 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 TFR2Q9UP52 801 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.56■□□□□ 0.562e-8■■■□□ 14.9
CTSB-222ENST00000531551 PLXNA3P51805 1871 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 GLP2RO95838 553 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 ZBED1O96006 694 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 RRM1P23921 792 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms