RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CGRRF1Q99675 332 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 EDEM2Q9BV94 578 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 ZNF518BQ9C0D4 1074 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 ZSCAN16Q9H4T2 348 aaPredicted RBP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 KIAA1586Q9HCI6 787 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 TFIP11Q9UBB9 837 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 ASCC3Q8N3C0 2202 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 AKAP13Q12802 2813 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 BCLAF3A2AJT9 711 aaKnown RBP19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 CLDN5O00501 218 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 SPTLC2O15270 562 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 STX6O43752 255 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 CAVIN2O95810 425 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 PFKLP17858 780 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 PTPN1P18031 435 aaKnown RBP19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 BCKDHBP21953 392 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 CASP1P29466 404 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 PMLP29590 882 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 SLC6A11P48066 632 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 SLC7A9P82251 487 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 CYP24A1Q07973 514 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 TAF10Q12962 218 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 PSMD6Q15008 389 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 WDR72Q3MJ13 1102 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 FAM26FQ5R3K3 315 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 TTC30AQ86WT1 665 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 FNBP1Q96RU3 617 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 LSM14BQ9BX40 385 aaKnown RBP19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 LRRC27Q9C0I9 530 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 CFAP97Q9P2B7 532 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 ANGPTL2Q9UKU9 493 aa19.63■□□□□ 0.73
SSSCA1-206ENST00000531405 ZZEF1O43149 2961 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 TACC1O75410 805 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 KCNK5O95279 499 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 OLFM2O95897 454 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 OAS1P00973 400 aaKnown RBP19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 HNRNPLP14866 589 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 MYL6P60660 151 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 TNNC1P63316 161 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 DHCR24Q15392 516 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 C12orf40Q86WS4 652 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 ADGRG2Q8IZP9 1017 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 MDGA1Q8NFP4 955 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 SCFD1Q8WVM8 642 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 ZNF516Q92618 1163 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 INTS4Q96HW7 963 aaKnown RBP19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 B3GNT5Q9BYG0 378 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 EHD2Q9NZN4 543 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 NXF1Q9UBU9 619 aaKnown RBP19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 MMP17Q9ULZ9 603 aa19.62■□□□□ 0.73
SSSCA1-206ENST00000531405 ASPMQ8IZT6 3477 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 LNP1A1A4G5 178 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 C4orf47A7E2U8 309 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 MBL2P11226 248 aaPredicted RBP19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 USP39Q53GS9 565 aaKnown RBP19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 TDRD10Q5VZ19 366 aaKnown RBP19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 PMS2CLQ68D20 193 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 PSAPL1Q6NUJ1 521 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 SHC4Q6S5L8 630 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 TMEM92Q6UXU6 159 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 RASSF3Q86WH2 238 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 ALLCQ8N6M5 410 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 XXYLT1Q8NBI6 393 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 CCDC26Q8TAB7 109 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 ELOVL4Q9GZR5 314 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 CUEDC2Q9H467 287 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 ZDHHC4Q9NPG8 344 aa19.61■□□□□ 0.73
SSSCA1-206ENST00000531405 WDFY3Q8IZQ1 3526 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 A8MXQ7 604 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 PATE3B3GLJ2 98 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 PPP6R2O75170 966 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 TIE1P35590 1138 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 PPP3CCP48454 512 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 CASP4P49662 377 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 AMPD3Q01432 767 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 KDSRQ06136 332 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 CRY1Q16526 586 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 RHBDF2Q6PJF5 856 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 B3GALNT2Q8NCR0 500 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 CNOT6LQ96LI5 555 aaKnown RBP19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 SLITRK1Q96PX8 696 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 C7orf25Q9BPX7 421 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 XYLT2Q9H1B5 865 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 BLZF1Q9H2G9 400 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
SSSCA1-206ENST00000531405 UBE4BO95155 1302 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 GIPC1O14908 333 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 KLF8O95600 359 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 CHRM1P11229 460 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 CDH8P55286 799 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 EHHADHQ08426 723 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 TRPC3Q13507 836 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 EMC10Q5UCC4 262 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 FOXD4L5Q5VV16 416 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 CNNM4Q6P4Q7 775 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 IQUBQ8NA54 791 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms