RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 KIAA0355O15063 1070 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 GYS1P13807 737 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 PLS1Q14651 629 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-213ENST00000530784 ODR4Q5SWX8 454 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 SULT6B1Q6IMI4 303 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 POC1BQ8TC44 478 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 LRGUKQ96M69 825 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 CGRRF1Q99675 332 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 ETAA1Q9NY74 926 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 ZNHIT2Q9UHR6 403 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 KNSTRNQ9Y448 316 aa8.6□□□□□ -1.03
CSDE1-213ENST00000530784 KIF13BQ9NQT8 1826 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 NUDT3O95989 172 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 CHEK2O96017 543 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 HSPA6P17066 643 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 CXCR5P32302 372 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
CSDE1-213ENST00000530784 DIS3LQ8TF46 1054 aaKnown RBP8.59□□□□□ -1.03
CSDE1-213ENST00000530784 SNX19Q92543 992 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 SLC35A4Q96G79 324 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 CDK5RAP3Q96JB5 506 aa8.59□□□□□ -1.03
CSDE1-213ENST00000530784 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-213ENST00000530784 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 TJP1Q07157 1748 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 E7ENX8 843 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 VPS4BO75351 444 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 KIF20AO95235 890 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 SRGNP10124 158 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 DPEP1P16444 411 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 CLK3P49761 638 aaKnown RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 MRPS35P82673 323 aaKnown RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 TAP2Q03519 686 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 ZNF169Q14929 603 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 PRR16Q569H4 304 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 VWA1Q6PCB0 445 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 TSHZ1Q6ZSZ6 1077 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 MICALCLQ6ZW33 695 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 LPIN2Q92539 896 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 SLC9A6Q92581 669 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 AIFM3Q96NN9 605 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 CNPPD1Q9BV87 410 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 TINAGL1Q9GZM7 467 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 SMOC2Q9H3U7 446 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 RIOX1Q9H6W3 641 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 ALG13Q9NP73 1137 aaKnown RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-213ENST00000530784 STXBP5LQ9Y2K9 1186 aa8.58□□□□□ -1.04
CSDE1-213ENST00000530784 MRC1P22897 1456 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 YY2O15391 372 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 PEX1O43933 1283 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 RFPL1O75677 317 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 NANOS3P60323 173 aaKnown RBP8.57□□□□□ -1.04
CSDE1-213ENST00000530784 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
CSDE1-213ENST00000530784 HLXQ14774 488 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-213ENST00000530784 B3GNT9Q6UX72 402 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 USP37Q86T82 979 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 DNAJC10Q8IXB1 793 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 PLBD2Q8NHP8 589 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 KLHDC4Q8TBB5 520 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 ARMT1Q9H993 441 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 NMRK2Q9NPI5 230 aa8.57□□□□□ -1.04
CSDE1-213ENST00000530784 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
CSDE1-213ENST00000530784 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-213ENST00000530784 ZAR1LA6NP61 321 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 GNAI2P04899 355 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 HDCP19113 662 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 DDR1Q08345 913 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 TCF15Q12870 199 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 ERCC6LQ2NKX8 1250 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 TAF2Q6P1X5 1199 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 PSD4Q8NDX1 1056 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 SLC35G2Q8TBE7 412 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 BRIX1Q8TDN6 353 aaKnown RBP8.56□□□□□ -1.04
CSDE1-213ENST00000530784 FOXJ2Q9P0K8 574 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 LRIT1Q9P2V4 623 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 PCDHA6Q9UN73 950 aa8.56□□□□□ -1.04
CSDE1-213ENST00000530784 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 M0QYG6 137 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 OVOL3O00110 214 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 HMOX1P09601 288 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 CHRM3P20309 590 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 KCNA3P22001 575 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 FOLR3P41439 243 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 NPTX2P47972 431 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 TOB1P50616 345 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-213ENST00000530784 SIM1P81133 766 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-213ENST00000530784 GTF2H3Q13889 308 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-213ENST00000530784 CELF5Q8N6W0 485 aaKnown RBP8.55□□□□□ -1.04
CSDE1-213ENST00000530784 SIMC1Q8NDZ2 872 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 ACTRT2Q8TDY3 377 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 SIK2Q9H0K1 926 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 RSAD1Q9HA92 442 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms