RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 DMAC2Q9NW81 257 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 MYH10P35580 1976 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 LEFTY2O00292 366 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 RTN3O95197 1032 aaPredicted RBP22.22■■□□□ 1.15
SMPD1-204ENST00000530395 KIF20AO95235 890 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 NR3C1P04150 777 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 CACNA2D1P54289 1103 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 IFRD2Q12894 506 aaPredicted RBP22.22■■□□□ 1.15
SMPD1-204ENST00000530395 TAF10Q12962 218 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 SCARA5Q6ZMJ2 495 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 NUP93Q8N1F7 819 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 CAMKK1Q8N5S9 505 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 PDZD8Q8NEN9 1154 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 GAB3Q8WWW8 586 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 ACDQ96AP0 544 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 MED10Q9BTT4 135 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 KCTD10Q9H3F6 313 aa22.22■■□□□ 1.15
SMPD1-204ENST00000530395 NCOR2Q9Y618 2525 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 CLDN5O00501 218 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 FOXD2O60548 495 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 RPP40O75818 363 aaKnown RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 C4BPAP04003 597 aaKnown RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 CCDC192P0DO97 292 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 YWHAQP27348 245 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 PXNP49023 591 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 CDH8P55286 799 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 NAIF1Q69YI7 327 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 DDX42Q86XP3 938 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 FAM160A2Q8N612 972 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-204ENST00000530395 RPLP0P6Q8NHW5 317 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 LINC00597Q9H2U6 94 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 SEMA4GQ9NTN9 838 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 HPSEQ9Y251 543 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 FRMD4BQ9Y2L6 1034 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 CPQQ9Y646 472 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 EML5Q05BV3 1969 aa22.21■■□□□ 1.15
SMPD1-204ENST00000530395 MED19A0JLT2 244 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 SLC9A3R1O14745 358 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 CALUO43852 315 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 OLFM2O95897 454 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 OAS1P00973 400 aaKnown RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 RPN1P04843 607 aaKnown RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 HOXC13P31276 330 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 SYKP43405 635 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 RAP1GAPP47736 663 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 ATXN1P54253 815 aaKnown RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 CSRP2Q16527 193 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 SGSM1Q2NKQ1 1148 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 CEP135Q66GS9 1140 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 CACNA2D4Q7Z3S7 1137 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 FAM35AQ86V20 835 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 OVCA2Q8WZ82 227 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 TAF4BQ92750 862 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 FBXO32Q969P5 355 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 SMARCD1Q96GM5 515 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 RTKNQ9BST9 563 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 DMAP1Q9NPF5 467 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-204ENST00000530395 TMEM30AQ9NV96 361 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 SMPD4Q9NXE4 827 aa22.2■■□□□ 1.14
SMPD1-204ENST00000530395 AKAP3O75969 853 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 VNN1O95497 513 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 MBL2P11226 248 aaPredicted RBP22.19■■□□□ 1.14
SMPD1-204ENST00000530395 TRIM21P19474 475 aaKnown RBP22.19■■□□□ 1.14
SMPD1-204ENST00000530395 ZXDBP98169 803 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 ZACNQ401N2 412 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 PRR23CQ6ZRP0 262 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 SYT13Q7L8C5 426 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 FILIP1Q7Z7B0 1213 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 NETO1Q8TDF5 533 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 TMC2Q8TDI7 906 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 HHIPQ96QV1 700 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 RNF38Q9H0F5 515 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 ATP6V1DQ9Y5K8 247 aa22.19■■□□□ 1.14
SMPD1-204ENST00000530395 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.19■■□□□ 1.14
SMPD1-204ENST00000530395 DLG4P78352 724 aa22.18■■□□□ 1.14
SMPD1-204ENST00000530395 LOXL4Q96JB6 756 aa22.18■■□□□ 1.14
SMPD1-204ENST00000530395 CFAP97Q9P2B7 532 aa22.18■■□□□ 1.14
SMPD1-204ENST00000530395 IKBKBO14920 756 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 AXIN1O15169 862 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 APBB3O95704 486 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 PIK3CAP42336 1068 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 DMC1Q14565 340 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 ACOT1Q86TX2 421 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 EZH1Q92800 747 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-204ENST00000530395 KCNK16Q96T55 309 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 IMPG2Q9BZV3 1241 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 SCAND2PQ9GZW5 306 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-204ENST00000530395 SDCBP2Q9H190 292 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 KRT82Q9NSB4 513 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 COMMD8Q9NX08 183 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 TRAF3IP3Q9Y228 551 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 SPTBN2O15020 2390 aa22.17■■□□□ 1.14
SMPD1-204ENST00000530395 SDK1Q7Z5N4 2213 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 FAM237AA0A1B0GTK4 181 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.16■■□□□ 1.14
SMPD1-204ENST00000530395 MAPK13O15264 365 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 AP1G2O75843 785 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 CYP17A1P05093 508 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 OPRD1P41143 372 aa22.16■■□□□ 1.14
SMPD1-204ENST00000530395 NDUFA8P51970 172 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms