RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 RNF148Q8N7C7 305 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 IPMKQ8NFU5 416 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PCYOX1Q9UHG3 505 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 CNTRLQ7Z7A1 2325 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 F7P08709 466 aaPredicted RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SNRPAP09012 282 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SERPINB3P29508 390 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 AP3M2P53677 418 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 TAP1Q03518 808 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PRPF39Q86UA1 669 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PABPC5Q96DU9 382 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 MECRQ9BV79 373 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SLC39A10Q9ULF5 831 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 OCRLQ01968 901 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SP2Q02086 613 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 PTPN20Q4JDL3 420 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 POLNQ7Z5Q5 900 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 FBXO41Q8TF61 875 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 E2F7Q96AV8 911 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 CDCA5Q96FF9 252 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ZCWPW1Q9H0M4 648 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 MYLK2Q9H1R3 596 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 GOLGA2P5Q9HBQ8 144 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 WDR35Q9P2L0 1181 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 GON4LQ3T8J9 2241 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ASB14A6NK59 587 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 CES2O00748 559 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 TSPAN3O60637 253 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SKIP12755 728 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 RPL22P35268 128 aaKnown RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 MEI4A8MW99 385 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 DHX15O43143 795 aaKnown RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ATP6V1G2O95670 118 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 AQP5P55064 265 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
SCN3B-206ENST00000530277 GAD2Q05329 585 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 RCN1Q15293 331 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 DNAJB3Q8WWF6 145 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 MRIQ9BWK5 157 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 ADA2Q9NZK5 511 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 FAM8A1Q9UBU6 413 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
SCN3B-206ENST00000530277 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
SCN3B-206ENST00000530277 SPTLC1O15269 473 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ENO3P13929 434 aaPredicted RBP12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ZDHHC24Q6UX98 284 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ART4Q93070 314 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CCDC68Q9H2F9 335 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 FBXO6Q9NRD1 293 aaPredicted RBP12.84□□□□□ -0.35
SCN3B-206ENST00000530277 PAK5Q9P286 719 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 FSCN2O14926 492 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 LIASO43766 372 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 B3GAT3O94766 335 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 KCNA2P16389 499 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 TNFRSF8P28908 595 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MLH1P40692 756 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 METTL23Q86XA0 190 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CD302Q8IX05 232 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MAGEB18Q96M61 343 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CDT1Q9H211 546 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 SENP1Q9P0U3 644 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 STOML1Q9UBI4 398 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms