RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ASCC3Q8N3C0 2202 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 FASNP49327 2511 aaKnown RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 TAF4O00268 1085 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 KAT7O95251 611 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 SYPP08247 313 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 ACAT1P24752 427 aaKnown RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 ANXA13P27216 316 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 EIF2DP41214 584 aaKnown RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 UBA7P41226 1012 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PTGER3P43115 390 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 MAGEA11P43364 429 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 LHX1P48742 406 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 ZNF131P52739 623 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 ATP2C1P98194 919 aaPredicted RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 TFAMQ00059 246 aaKnown RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 CFAP221Q4G0U5 840 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PREPLQ4J6C6 727 aaPredicted RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 TMEM119Q4V9L6 283 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 ZC2HC1CQ53FD0 456 aaPredicted RBP9.63□□□□□ -0.87
VPS11-203ENST00000529545 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 SLC39A4Q6P5W5 647 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 SLC36A4Q6YBV0 504 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 C4orf50Q6ZRC1 276 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PIP4P1Q86T03 277 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 CHCHD4Q8N4Q1 142 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 KIAA1958Q8N8K9 716 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 IL17RCQ8NAC3 791 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 AK8Q96MA6 479 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 FNBP1Q96RU3 617 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 TMEM74BQ9NUR3 256 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PCDHB9Q9Y5E1 797 aa9.63□□□□□ -0.87
VPS11-203ENST00000529545 PCNX2A6NKB5 2137 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 PI4KAP42356 2102 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ATXN2Q99700 1313 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 TNRC6BQ9UPQ9 1833 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 TCRBV21S2A2A0A5A6 115 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 FAM221BA6H8Z2 402 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 SGK1O00141 431 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 LEFTY2O00292 366 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ADH1CP00326 375 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 CYP17A1P05093 508 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ITGB3P05106 788 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 SERPINF2P08697 491 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 KRT19P08727 400 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ITPKAP23677 461 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 GRIK1P39086 918 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 GRIA2P42262 883 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 TNFRSF4P43489 277 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 PPP3CCP48454 512 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 RPL6Q02878 288 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 RESTQ13127 1097 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 DHCR24Q15392 516 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 MAPRE1Q15691 268 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ARL6IP4Q66PJ3 421 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 TRMT11Q7Z4G4 463 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 FILIP1Q7Z7B0 1213 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 PROSER1Q86XN7 944 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 DDX42Q86XP3 938 aaKnown RBP eCLIP9.62□□□□□ -0.87
VPS11-203ENST00000529545 ADGRF2Q8IZF7 708 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 LRRC15Q8TF66 581 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 CEP295NLQ96MC4 621 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ARHGEF4Q9NR80 690 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 MAGEC2Q9UBF1 373 aaPredicted RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 MBD1Q9UIS9 605 aaPredicted RBP9.62□□□□□ -0.87
VPS11-203ENST00000529545 PILRBQ9UKJ0 227 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 L1RE1Q9UN81 338 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 EXOC7Q9UPT5 735 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 SNX9Q9Y5X1 595 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 STYXL1Q9Y6J8 313 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 PTPRDP23468 1912 aa9.62□□□□□ -0.87
VPS11-203ENST00000529545 ADAMTS20P59510 1910 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 CEP192Q8TEP8 1941 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 ADAMTS9Q9P2N4 1935 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 PLXND1Q9Y4D7 1925 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 DSPP15924 2871 aaKnown RBP9.61□□□□□ -0.87
VPS11-203ENST00000529545 EIF4E1BA6NMX2 242 aaKnown RBP9.61□□□□□ -0.87
VPS11-203ENST00000529545 TISP43B9A030 160 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 LDHAP00338 332 aaKnown RBP9.61□□□□□ -0.87
VPS11-203ENST00000529545 ABL1P00519 1130 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS11-203ENST00000529545 SLC6A11P48066 632 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 SLC7A9P82251 487 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 RBP5P82980 135 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 MYO1EQ12965 1108 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 BTBD8Q5XKL5 378 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 C19orf48Q6RUI8 117 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 VSTM1Q6UX27 236 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 DENND5BQ6ZUT9 1274 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
VPS11-203ENST00000529545 MINDY1Q8N5J2 469 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms