RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SMG7Q92540 1137 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 MRPS31Q92665 395 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SECISBP2LQ93073 1101 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 HLA-CQ95604 372 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TWNKQ96RR1 684 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CDX2Q99626 313 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TTLL2Q9BWV7 592 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 TSGA10Q9BZW7 698 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 NACA2Q9H009 215 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ADAM7Q9H2U9 754 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 NHEJ1Q9H9Q4 299 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PARVAQ9NVD7 372 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CLDND1Q9NY35 253 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ADAM22Q9P0K1 906 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 PCDH10Q9P2E7 1040 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 HMGXB4Q9UGU5 601 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ADAMTS1Q9UHI8 967 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 STAP1Q9ULZ2 295 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SCML2Q9UQR0 700 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
SSBP3-211ENST00000528787 ZNF638Q14966 1978 aaKnown RBP8.35□□□□□ -1.07
SSBP3-211ENST00000528787 RANBP2P49792 3224 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 EPOPA6NHQ4 379 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 EIF3CLB5ME19 914 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 CAPN9O14815 690 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PER2O15055 1255 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 HSF2BPO75031 334 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 F9P00740 461 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ERBB2P04626 1255 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 MMEP08473 750 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 H2AFZP0C0S5 128 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SLC2A3P11169 496 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 FECHP22830 423 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GBP1P32455 592 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GABRB2P47870 512 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 RPL34P49207 117 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 TKTL1P51854 596 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 KIF11P52732 1056 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SLC5A3P53794 718 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GSCP56915 257 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 FMO1Q01740 532 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 APBA1Q02410 837 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 HYAL1Q12794 435 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 KCNC3Q14003 757 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ACAP1Q15027 740 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 RAB41Q5JT25 222 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 TAF3Q5VWG9 929 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PM20D1Q6GTS8 502 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 LLGL2Q6P1M3 1020 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ALKBH5Q6P6C2 394 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 KLHDC10Q6PID8 442 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 H2AFVQ71UI9 128 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 DNAJB7Q7Z6W7 309 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GPR149Q86SP6 731 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 FBXO32Q969P5 355 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ACSF2Q96CM8 615 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PDLIM2Q96JY6 352 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 EIF3CQ99613 913 aaKnown RBP8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SELENOOQ9BVL4 669 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 SLC4A5Q9BY07 1137 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ABCC13Q9NSE7 274 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GDE1Q9NZC3 331 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 UVRAGQ9P2Y5 699 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 CD207Q9UJ71 328 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 ATG2AQ2TAZ0 1938 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 GREB1Q4ZG55 1949 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 TRANK1O15050 2925 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
SSBP3-211ENST00000528787 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 TRAV19A0A0A6YYK7 116 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 FAM92AA1XBS5 289 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 RBAK-RBAKDNI3L0D1 243 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 RFXAPO00287 272 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 CLDN5O00501 218 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 ADAM12O43184 909 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 AP5Z1O43299 807 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 ZSCAN12O43309 604 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 KRT86O43790 486 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 CCDC175P0C221 793 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms