RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-206	ENST00000528748	EDEM3	Q9BZQ6	932 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	TRIM5	Q9C035	493 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	CRISPLD1	Q9H336	500 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	CYP4F11	Q9HBI6	524 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	POLM	Q9NP87	494 aa	Predicted RBP	11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	NLRC4	Q9NPP4	1024 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	CEP72	Q9P209	647 aa		11.64	□□□□□ -0.55
CDC27-206	ENST00000528748	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CLDN5	O00501	218 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	PRRG1	O14668	218 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	KRT5	P13647	590 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	BDNF	P23560	247 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CYP2F1	P24903	491 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	LTBR	P36941	435 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	USP8	P40818	1118 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	JAM2	P57087	298 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CYP27A1	Q02318	531 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CNGA2	Q16280	664 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CFAP221	Q4G0U5	840 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	FIGN	Q5HY92	759 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	ARHGAP17	Q68EM7	881 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	ELMSAN1	Q6PJG2	1045 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	FUK	Q8N0W3	1084 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	MYLPF	Q96A32	169 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	HNRNPAB	Q99729	332 aa	Known RBP	11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	ABCB6	Q9NP58	842 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	MAN1C1	Q9NR34	630 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CLDND1	Q9NY35	253 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	ABI2	Q9NYB9	513 aa	Predicted RBP	11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CLEC1B	Q9P126	229 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	CDH23	Q9H251	3354 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	SZT2	Q5T011	3432 aa		11.63	□□□□□ -0.55
CDC27-206	ENST00000528748	MYH10	P35580	1976 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	FIGNL2	A6NMB9	653 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748		F8VZ95	297 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	CYP26A1	O43174	497 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	PAPLN	O95428	1278 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	C8A	P07357	584 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SRGAP2B	P0DMP2	458 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	CCDC130	P13994	396 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	CD19	P15391	556 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	STAT1	P42224	750 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ABL2	P42684	1182 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	MAGEA11	P43364	429 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	BPIFB4	P59827	614 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	DLX2	Q07687	328 aa	Predicted RBP	11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	MGAT5B	Q3V5L5	792 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SGO2	Q562F6	1265 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	LIN9	Q5TKA1	542 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SPECC1L	Q69YQ0	1117 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ANKRD54	Q6NXT1	300 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SYCE2	Q6PIF2	218 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	VSTM1	Q6UX27	236 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	CACNA2D4	Q7Z3S7	1137 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	VSTM4	Q8IW00	320 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	TTC9B	Q8N6N2	239 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SLC7A14	Q8TBB6	771 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SLC2A14	Q8TDB8	520 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ZNF606	Q8WXB4	792 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	TFAP2B	Q92481	460 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	SPAG5	Q96R06	1193 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	INSM2	Q96T92	566 aa	Predicted RBP	11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ZSWIM1	Q9BR11	485 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	MED10	Q9BTT4	135 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ZNF518B	Q9C0D4	1074 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	TTYH3	Q9C0H2	523 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	FAM49B	Q9NUQ9	324 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	DZANK1	Q9NVP4	752 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	ZDHHC7	Q9NXF8	308 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	MYO6	Q9UM54	1294 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	PCDHB11	Q9Y5F2	797 aa		11.62	□□□□□ -0.55
CDC27-206	ENST00000528748	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	6e-7	■■■□□ 18.6
CDC27-206	ENST00000528748	ITIH6	Q6UXX5	1313 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	TRANK1	O15050	2925 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	PTPRD	P23468	1912 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	CCDC195	A0A1B0GUA6	201 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	RFPL2	O75678	378 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	SOAT2	O75908	522 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	CALCA	P01258	141 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	PNMA6A	P0CW24	399 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	HOXB8	P17481	243 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	ADORA2B	P29275	332 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	HOXA9	P31269	272 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	SOX5	P35711	763 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	CTSO	P43234	321 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	ALDH1A3	P47895	512 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	ZNF75D	P51815	510 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	RPL10A	P62906	217 aa	Known RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	DDR2	Q16832	855 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	PPM1L	Q5SGD2	360 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	LCLAT1	Q6UWP7	414 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	EP400NL	Q6ZTU2	488 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	FAM35A	Q86V20	835 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	C12orf76	Q8N812	135 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	ANKRD52	Q8NB46	1076 aa		11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	CMAS	Q8NFW8	434 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	MAFA	Q8NHW3	353 aa	Predicted RBP	11.61	□□□□□ -0.55
CDC27-206	ENST00000528748	IQCD	Q96DY2	449 aa		11.61	□□□□□ -0.55

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