RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	GNAZ	P19086	355 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ELK3	P41970	407 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ZNF143	P52747	638 aa	Predicted RBP	24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	CDH8	P55286	799 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	TAF5	Q15542	800 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	LY6K	Q17RY6	165 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	FAM47C	Q5HY64	1035 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ANKRD20A2	Q5SQ80	823 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ANKRD20A1	Q5TYW2	823 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ANKRD20A3	Q5VUR7	823 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	SH2D5	Q6ZV89	423 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	LONP2	Q86WA8	852 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	C1orf127	Q8N9H9	656 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	HSPH1	Q92598	858 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	TMEM176A	Q96HP8	235 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	APOPT1	Q96IL0	206 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	TUBB6	Q9BUF5	446 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	FRMD8	Q9BZ67	464 aa	Predicted RBP	24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	ELOVL4	Q9GZR5	314 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	CHMP2B	Q9UQN3	213 aa		24.43	■■□□□ 1.5
GSDMD-208	ENST00000528475	CHAD	O15335	359 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	CBX6	O95503	412 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	HMGCR	P04035	888 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	KRT19	P08727	400 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	CALB2	P22676	271 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	MARK3	P27448	753 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ATIC	P31939	592 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ETV4	P43268	484 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	GPD2	P43304	727 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	TFDP2	Q14188	446 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ZNF449	Q6P9G9	518 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	IGDCC3	Q8IVU1	814 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ENDOV	Q8N8Q3	282 aa	Known RBP	24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	TWNK	Q96RR1	684 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	CALN1	Q9BXU9	219 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	TRIM55	Q9BYV6	548 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	MGAM	O43451	1857 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	GOLGB1	Q14789	3259 aa	Known RBP	24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	LTBP3	Q9NS15	1303 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	LPXN	O60711	386 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	CXCL8	P10145	99 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	HIRA	P54198	1017 aa	Predicted RBP	24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	OSTN	P61366	133 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ZNF200	P98182	395 aa	Predicted RBP	24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	PTK7	Q13308	1070 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	PEBP4	Q96S96	227 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	ADPGK	Q9BRR6	497 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	CNPY3	Q9BT09	278 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	SMYD3	Q9H7B4	428 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	DONSON	Q9NYP3	566 aa		24.42	■■□□□ 1.5
GSDMD-208	ENST00000528475	TCRBV9S1A1T	A0A576	114 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	B4GALT5	O43286	388 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	VDR	P11473	427 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	MBTD1	Q05BQ5	628 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	DARS2	Q6PI48	645 aa	Known RBP	24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	MTDH	Q86UE4	582 aa	Known RBP	24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	RFWD2	Q8NHY2	731 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	CXorf38	Q8TB03	319 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	STK32A	Q8WU08	396 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	WDR91	A4D1P6	747 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	GOLGA8R	I6L899	631 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	INO80B-WBP1	J3KQ70	363 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	DNAJC6	O75061	913 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	GPD1	P21695	349 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	CFAP61	Q8NHU2	1237 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	TSSK1B	Q9BXA7	367 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	NFKBIZ	Q9BYH8	718 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	INO80B	Q9C086	356 aa	Predicted RBP	24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	IKBKG	Q9Y6K9	419 aa		24.41	■■□□□ 1.5
GSDMD-208	ENST00000528475	KBTBD13	C9JR72	458 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	PIAS1	O75925	651 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	ARIH2	O95376	493 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	INHBA	P08476	426 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	NFIC	P08651	508 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	EPHB2	P29323	1055 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	CELF3	Q5SZQ8	465 aa	Known RBP	24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	TREML2	Q5T2D2	321 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	TRIM50	Q86XT4	487 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	TMEM192	Q8IY95	271 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	TAB3	Q8N5C8	712 aa	Predicted RBP	24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	PTPRN2	Q92932	1015 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	RTP4	Q96DX8	246 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	SPATC1L	Q9H0A9	340 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	NKX1-2	Q9UD57	310 aa	Predicted RBP	24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475	HMGXB4	Q9UGU5	601 aa		24.4	■■□□□ 1.5
GSDMD-208	ENST00000528475		M0QYV0	167 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	SLC26A2	P50443	739 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	CDH6	P55285	790 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	NAA25	Q14CX7	972 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	PRKD1	Q15139	912 aa	Predicted RBP	24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	HSDL1	Q3SXM5	330 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	KBTBD12	Q3ZCT8	623 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	FAM102A	Q5T9C2	384 aa	Predicted RBP	24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	SERAC1	Q96JX3	654 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	NLRP4	Q96MN2	994 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	KLF6	Q99612	283 aa	Predicted RBP	24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	MIS12	Q9H081	205 aa		24.39	■■□□□ 1.5
GSDMD-208	ENST00000528475	FAM124B	Q9H5Z6	455 aa	Predicted RBP	24.39	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms