RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
SOX6-211ENST00000528429 PIWIL1Q96J94 861 aaKnown RBP8.1□□□□□ -1.11
SOX6-211ENST00000528429 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SPATA7Q9P0W8 599 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 ZSCAN9O15535 394 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 TTI1O43156 1089 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PFKMP08237 780 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 FOSL1P15407 271 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 HLTFQ14527 1009 aaKnown RBP eCLIP8.09□□□□□ -1.11
SOX6-211ENST00000528429 DSC3Q14574 896 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 STILQ15468 1287 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TRADDQ15628 312 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 BEND6Q5SZJ8 279 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 ECHDC2Q86YB7 292 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 SLC13A5Q86YT5 568 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 SCUBE3Q8IX30 993 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 MAGOHBQ96A72 148 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 PGBD4Q96DM1 585 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 B3GNT5Q9BYG0 378 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TTC7AQ9ULT0 858 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 TCRBV5S1A1TA0A578 114 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 SIGLEC16A6NMB1 481 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 CLDN5O00501 218 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 ZNF623O75123 536 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 SASH3O75995 380 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 KRT1P04264 644 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 GJA8P48165 433 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 CARSP49589 748 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 TAP1Q03518 808 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PIGHQ14442 188 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 CDO1Q16878 200 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 SMTNL2Q2TAL5 461 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TTC31Q49AM3 519 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 GLE1Q53GS7 698 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 FAM26DQ5JW98 314 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PPP1R15BQ5SWA1 713 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 AGAP9Q5VTM2 703 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 KAZNQ674X7 775 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 FAAH2Q6GMR7 532 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 CCNI2Q6ZMN8 369 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 FAM183BPQ6ZVS7 135 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 LRRC8DQ7L1W4 858 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 UBE2Q1Q7Z7E8 422 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 MRPL10Q7Z7H8 261 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 PACS2Q86VP3 889 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 B3GALNT2Q8NCR0 500 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 LSM14AQ8ND56 463 aaKnown RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 TNIP3Q96KP6 325 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 FAM118BQ9BPY3 351 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TRIM51Q9BSJ1 452 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 MED10Q9BTT4 135 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 FAM124BQ9H5Z6 455 aaPredicted RBP8.09□□□□□ -1.11
SOX6-211ENST00000528429 ZWILCHQ9H900 591 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PCSK1NQ9UHG2 260 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 LCMT1Q9UIC8 334 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 MTUS1Q9ULD2 1270 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TMCC3Q9ULS5 477 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 NFU1Q9UMS0 254 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 TMEM98Q9Y2Y6 226 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 RALGAPA2Q2PPJ7 1873 aa8.09□□□□□ -1.11
SOX6-211ENST00000528429 F8W810 466 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 PSTPIP1O43586 416 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 CSPG5O95196 566 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 PYGBP11216 843 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 RALAP11233 206 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 CCL5P13501 91 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 LCP1P13796 627 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 TKTP29401 623 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 BRCC3P46736 316 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 BCAT1P54687 386 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 ZNF268Q14587 947 aaPredicted RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 TAF5Q15542 800 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 MDH1BQ5I0G3 518 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 KCNT1Q5JUK3 1230 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 GLB1LQ6UWU2 654 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DDX42Q86XP3 938 aaKnown RBP eCLIP8.08□□□□□ -1.12
SOX6-211ENST00000528429 ZDHHC14Q8IZN3 488 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 TOP6BLQ8N6T0 577 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 PRELID2Q8N945 189 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 ZNF483Q8TF39 744 aaPredicted RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 C1orf54Q8WWF1 131 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 ATG4AQ8WYN0 398 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 MIEF2Q96C03 454 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DPH5Q9H2P9 285 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DDX43Q9NXZ2 648 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 LRRD1A4D1F6 860 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DNM1LO00429 736 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 RARAP10276 462 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SKIP12755 728 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SELPP16109 830 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 KCNJ1P48048 391 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SESN3P58005 492 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 ATP11AP98196 1134 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms