RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 NAT10Q9H0A0 1025 aaKnown RBP14.15□□□□□ -0.14
CAPN1-209ENST00000527469 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 KIAA1257Q9ULG3 409 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 MRPS17Q9Y2R5 130 aaKnown RBP14.15□□□□□ -0.14
CAPN1-209ENST00000527469 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
CAPN1-209ENST00000527469 MYH10P35580 1976 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 C2orf78A6NCI8 922 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 ZNF840PA6NDX5 716 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 KCNJ18B7U540 433 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 MAN2B1O00754 1011 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 CHADO15335 359 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 VDRP11473 427 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 KRT5P13647 590 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 PFKLP17858 780 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 ACO1P21399 889 aaKnown RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 AVPR2P30518 371 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 CLCN5P51795 746 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 MFAP3P55082 362 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 KCNJ12Q14500 433 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 UBXN2BQ14CS0 331 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 GOLGA7BQ2TAP0 167 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 ARHGAP17Q68EM7 881 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 ZNF852Q6ZMS4 543 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 CSNK1G1Q9HCP0 422 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 CHORDC1Q9UHD1 332 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-209ENST00000527469 CCL26Q9Y258 94 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 PIAS3Q9Y6X2 628 aa14.14□□□□□ -0.15
CAPN1-209ENST00000527469 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 TNFRSF10BO14763 440 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 BEST1O76090 585 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 PAEPP09466 180 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 AOC1P19801 751 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 USP8P40818 1118 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 VCPP55072 806 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 VWA3BQ502W6 1294 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 HECTD3Q5T447 861 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 PHLDB3Q6NSJ2 640 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ENOSF1Q7L5Y1 443 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ANKRD52Q8NB46 1076 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 RBBP8NLQ8NC74 664 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 LMO3Q8TAP4 145 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ENOX1Q8TC92 643 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 KAT5Q92993 513 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 PRRX2Q99811 253 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 NDST4Q9H3R1 872 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 PNPLA8Q9NP80 782 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 TLR8Q9NR97 1041 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 GMIPQ9P107 970 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 SIT1Q9Y3P8 196 aa14.13□□□□□ -0.15
CAPN1-209ENST00000527469 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
CAPN1-209ENST00000527469 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 GTPBP10A4D1E9 387 aaKnown RBP14.12□□□□□ -0.15
CAPN1-209ENST00000527469 MBL2P11226 248 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-209ENST00000527469 IFNAR2P48551 515 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 BCAT1P54687 386 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 STARD6P59095 220 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 MYL5Q02045 173 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 MTF1Q14872 753 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 TCP11X2Q5H9J9 407 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 C1orf228Q6PIY5 440 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 TRIM65Q6PJ69 517 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN1-209ENST00000527469 ZMIZ2Q8NF64 920 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 TTC8Q8TAM2 541 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 SLC22A12Q96S37 553 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 NELL2Q99435 816 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 FOXQ1Q9C009 403 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 GKN1Q9NS71 199 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 SMPD4Q9NXE4 827 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 SCML2Q9UQR0 700 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 NCANO14594 1321 aa14.12□□□□□ -0.15
CAPN1-209ENST00000527469 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 NCAM2O15394 837 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 CYP26A1O43174 497 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 SETSIPP0DME0 302 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 GLULP15104 373 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 SLC9A1P19634 815 aa14.11□□□□□ -0.15
CAPN1-209ENST00000527469 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms