RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CACNA2D4Q7Z3S7 1137 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-205ENST00000527046 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 TMEM110Q86TL2 294 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 NUP93Q8N1F7 819 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 TC2NQ8N9U0 490 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 SHKBP1Q8TBC3 707 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 STK32AQ8WU08 396 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
NEDD8-205ENST00000527046 SYN2Q92777 582 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-205ENST00000527046 TRMT2BQ96GJ1 504 aaKnown RBP11.38□□□□□ -0.59
NEDD8-205ENST00000527046 ZNF512Q96ME7 567 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-205ENST00000527046 ZSWIM3Q96MP5 696 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 DNAJC7Q99615 494 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 GRPEL1Q9HAV7 217 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 PNPLA8Q9NP80 782 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 OSER1Q9NX31 292 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
NEDD8-205ENST00000527046 PRUNE2Q8WUY3 3088 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 COL6A3P12111 3177 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 M0QYV0 167 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CSH1P0DML2 217 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CSH2P0DML3 217 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 FERP16591 822 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 KRT9P35527 623 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 RGS7P49802 495 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 BCAT1P54687 386 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 ADKP55263 362 aaKnown RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 NOMO3P69849 1222 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 ARID5AQ03989 594 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 BST2Q10589 180 aaKnown RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 TAF10Q12962 218 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 PTP4A2Q12974 167 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 ATAT1Q5SQI0 421 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 STXBP5Q5T5C0 1151 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 SFMBT2Q5VUG0 894 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 DENND5BQ6ZUT9 1274 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 MYADMQ96S97 322 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CPXM1Q96SM3 734 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CHP1Q99653 195 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 AGPAT1Q99943 283 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 HAUS4Q9H6D7 363 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 NMUR1Q9HB89 426 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 CHORDC1Q9UHD1 332 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
NEDD8-205ENST00000527046 LUC7L2Q9Y383 392 aaKnown RBP11.37□□□□□ -0.59
NEDD8-205ENST00000527046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.37□□□□□ -0.593e-9■■□□□ 11.5
NEDD8-205ENST00000527046 FAM170AA1A519 330 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 ZNF840PA6NDX5 716 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PIK3R2O00459 728 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.591e-12■□□□□ 8.2
NEDD8-205ENST00000527046 PAPSS1O43252 624 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 MFAP3LO75121 409 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 XYLBO75191 536 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 FYNP06241 537 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SETSIPP0DME0 302 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SRGAP2BP0DMP2 458 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 CDC25BP30305 580 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 GABRB2P47870 512 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 ZXDBP98169 803 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PLD1Q13393 1074 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PTPN20Q4JDL3 420 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PABPC1LQ4VXU2 614 aaKnown RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SNX30Q5VWJ9 437 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 HFE2Q6ZVN8 426 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 DNAAF5Q86Y56 855 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SCML4Q8N228 414 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 OR8K1Q8NGG5 319 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 CLEC4CQ8WTT0 213 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 IQCDQ96DY2 449 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 HSFY1Q96LI6 401 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SLC22A12Q96S37 553 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SLC46A2Q9BY10 475 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 RNF38Q9H0F5 515 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 COMMD8Q9NX08 183 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 SCML2Q9UQR0 700 aa11.36□□□□□ -0.59
NEDD8-205ENST00000527046 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
NEDD8-205ENST00000527046 NCANO14594 1321 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 CLUHO75153 1309 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 TCRBV5S1A1TA0A578 114 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 MED7O43513 233 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 ERBB2P04626 1255 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 TPM3P06753 285 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 USP17L7P0C7H9 530 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 MYL4P12829 197 aa11.35□□□□□ -0.59
NEDD8-205ENST00000527046 CEBPBP17676 345 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms