RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 GTSE1Q9NYZ3 720 aa19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 KIF26AQ9ULI4 1882 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-216ENST00000526055 CACNA1IQ9P0X4 2223 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 FAM92AA1XBS5 289 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 C2orf78A6NCI8 922 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 TRIM49BA6NDI0 452 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 TNFRSF10BO14763 440 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 PMM2O15305 246 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 AP1G2O75843 785 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 OLFM2O95897 454 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SP9P0CG40 484 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 CHRNB1P11230 501 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SLC7A9P82251 487 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 MTF1Q14872 753 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 DGKKQ5KSL6 1271 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SNX30Q5VWJ9 437 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SLC2A14Q8TDB8 520 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SEMA4DQ92854 862 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 EXOC4Q96A65 974 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 SLC22A12Q96S37 553 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 CYP2S1Q96SQ9 504 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 KCNK16Q96T55 309 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 LMAN1LQ9HAT1 526 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 PNPLA8Q9NP80 782 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 HMGXB4Q9UGU5 601 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 ZNF638Q14966 1978 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 COL4A3Q01955 1670 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 ANAPC1Q9H1A4 1944 aa19.55■□□□□ 0.72
TSPAN4-216ENST00000526055 OAS1P00973 400 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 FAM200BP0CF97 657 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 CD44P16070 742 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 TUBP50607 506 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 SLC5A3P53794 718 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 TNK2Q07912 1038 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 TTI2Q6NXR4 508 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 MAML2Q8IZL2 1156 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 SYNPOQ8N3V7 929 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 SH3RF2Q8TEC5 729 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 OSCP1Q8WVF1 389 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 FBXO32Q969P5 355 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 SLC35C1Q96A29 364 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 HPS4Q9NQG7 708 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 PRMT8Q9NR22 394 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 WDR87Q6ZQQ6 2873 aa19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 ZFHX2Q9C0A1 2572 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-216ENST00000526055 PPP1R3GB7ZBB8 358 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 CCDC130P13994 396 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 BMP6P22004 513 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 SOX9P48436 509 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 PPP2R5DQ14738 602 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 ISM2Q6H9L7 571 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 DDX42Q86XP3 938 aaKnown RBP eCLIP19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 CPA6Q8N4T0 437 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 C12orf29Q8N999 325 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 ZMIZ2Q8NF64 920 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 RIN3Q8TB24 985 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 WHAMMQ8TF30 809 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 NELFBQ8WX92 580 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 ATP2A3Q93084 1043 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 NKD2Q969F2 451 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 CYFIP2Q96F07 1278 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 TWNKQ96RR1 684 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 SMOQ99835 787 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 FAM126AQ9BYI3 521 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 FAM49BQ9NUQ9 324 aa19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 DUS2Q9NX74 493 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-216ENST00000526055 GFRA3O60609 400 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 GNA14O95837 355 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 ZDHHC11BP0C7U3 371 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 CD58P19256 250 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 IFNAR2P48551 515 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 CCR3P51677 355 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 MTAPQ13126 283 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 ORC1Q13415 861 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 CBWD6Q4V339 395 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 CBWD3Q5JTY5 395 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 CBWD5Q5RIA9 395 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 KLHL10Q6JEL2 608 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 TXNDC11Q6PKC3 985 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 DUSP9Q99956 384 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 EBF3Q9H4W6 596 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.52■□□□□ 0.726e-7■■■■■ 76.9
TSPAN4-216ENST00000526055 CISHQ9NSE2 258 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 KIAA1468Q9P260 1216 aa19.52■□□□□ 0.72
TSPAN4-216ENST00000526055 TRDMT1O14717 391 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 P4HA2O15460 535 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 ABL1P00519 1130 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 TBXAS1P24557 533 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 MAP3K7CLP57077 242 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 YWHAEP62258 255 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 CETN1Q12798 172 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 NR1H3Q13133 447 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 PAK1Q13153 545 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 CCDC40Q4G0X9 1142 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 HECTD3Q5T447 861 aa19.51■□□□□ 0.71
TSPAN4-216ENST00000526055 SPEM1Q8N4L4 309 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms