RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 SPIDRQ14159 915 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 KRT32Q14532 448 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 STXBP2Q15833 593 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 ZNF528Q3MIS6 628 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 Q4G0T1 1027 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RARS2Q5T160 578 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 EGFLAMQ63HQ2 1017 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 IL31Q6EBC2 164 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 ZNF280DQ6N043 979 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 ARMCX5Q6P1M9 558 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CCDC62Q6P9F0 684 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SLC30A10Q6XR72 485 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CYFIP1Q7L576 1253 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 OTOP3Q7RTS5 596 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 MAATS1Q7Z4T9 603 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CD302Q8IX05 232 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 DHX40Q8IX18 779 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 CKAP2LQ8IYA6 745 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 ATP11CQ8NB49 1132 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 STKLD1Q8NE28 680 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RASGRP4Q8TDF6 673 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 MAIP1Q8WWC4 291 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RRP36Q96EU6 259 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 RAB3IPQ96QF0 476 aaPredicted RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 EIF2AQ9BY44 585 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 XPO4Q9C0E2 1151 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 CNOT10Q9H9A5 744 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 TBC1D17Q9HA65 648 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 RC3H2Q9HBD1 1191 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 NGRNQ9NPE2 291 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 QPCTLQ9NXS2 382 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 IL1RAPL1Q9NZN1 696 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SPATA7Q9P0W8 599 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 WNT16Q9UBV4 365 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 TPCN1Q9ULQ1 816 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 CA14Q9ULX7 337 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 SMG5Q9UPR3 1016 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 LUC7L2Q9Y383 392 aaKnown RBP5.35□□□□□ -1.55
CD44-218ENST00000525469 PCDHGA2Q9Y5H1 932 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 C2orf16Q68DN1 1984 aa5.35□□□□□ -1.55
CD44-218ENST00000525469 IGKV6D-41A0A0C4DH26 115 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 TCRBV5S4A2TA0A5A2 114 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 F8VZ95 297 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 MYO1FO00160 1098 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 CYTH3O43739 400 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 ATP5HO75947 161 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 WEE2P0C1S8 567 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SMIM10L2AP0DMW4 78 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SMIM10L2BP0DMW5 78 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 RPL13P26373 211 aaKnown RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 SMARCA1P28370 1054 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KRT9P35527 623 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 TRPC1P48995 793 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 VAV2P52735 878 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 PDE1AP54750 535 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 ERVFC1P60507 584 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SHC2P98077 582 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 FANCCQ00597 558 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KRT17Q04695 432 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KLC1Q07866 573 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 MRPL58Q14197 206 aaKnown RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 ITIH4Q14624 930 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 CAMK4Q16566 473 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 LONRF3Q496Y0 759 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 NAA35Q5VZE5 725 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KIAA1841Q6NSI8 718 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KLC3Q6P597 504 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 C6orf89Q6UWU4 347 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 AACSQ86V21 672 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 NLRP14Q86W24 1093 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 TMTC1Q8IUR5 882 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 LRRC49Q8IUZ0 686 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 IQCF2Q8IXL9 164 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 AOPEPQ8N6M6 819 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 PDILTQ8N807 584 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 NSUN6Q8TEA1 469 aaKnown RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 ZNF473Q8WTR7 871 aaKnown RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 MRPS27Q92552 414 aaKnown RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 CAVIN3Q969G5 261 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 DHX58Q96C10 678 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 EAF2Q96CJ1 260 aaPredicted RBP5.34□□□□□ -1.55
CD44-218ENST00000525469 GPATCH3Q96I76 525 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 FAM81BQ96LP2 452 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SPATA33Q96N06 139 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 OLFM3Q96PB7 478 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 TCF25Q9BQ70 676 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SDF4Q9BRK5 362 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 FTHL17Q9BXU8 183 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 KCNK12Q9HB15 430 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 NOD2Q9HC29 1040 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 SLC39A2Q9NP94 309 aa5.34□□□□□ -1.55
CD44-218ENST00000525469 TBCCD1Q9NVR7 557 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms