RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SLC9A7Q96T83 725 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 POP1Q99575 1024 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CBWD1Q9BRT8 395 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 LXNQ9BS40 222 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 C16orf70Q9BSU1 422 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TIPINQ9BVW5 301 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 FOXP3Q9BZS1 431 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 TUT1Q9H6E5 874 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CERS4Q9HA82 394 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 PRDM6Q9NQX0 595 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CHST7Q9NS84 486 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 SEPT11Q9NVA2 429 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 HSPBP1Q9NZL4 362 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 NOP53Q9NZM5 478 aaKnown RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 CTNNAL1Q9UBT7 734 aa8.24□□□□□ -1.09
SPIDR-223ENST00000524033 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-223ENST00000524033 ABHD14A-ACY1A0A1B0GW23 586 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 RFXAPO00287 272 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CLDN3O15551 220 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 SPOPO43791 374 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 GDF9O60383 454 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 NBNO60934 754 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ZIC2O95409 532 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CXCL10P02778 98 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 DLATP10515 647 aaKnown RBP8.23□□□□□ -1.09
SPIDR-223ENST00000524033 UNGP13051 313 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-223ENST00000524033 PLS3P13797 630 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CYP11B1P15538 503 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 KLRC2P26717 231 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 GCAP28676 217 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 FOXN2P32314 431 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ICAM3P32942 547 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 THPOP40225 353 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 SLC1A1P43005 524 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 GCLMP48507 274 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 RARRES1P49788 294 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ITGA8P53708 1063 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 MFAP3P55082 362 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 MRPS5P82675 430 aaKnown RBP8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CETN1Q12798 172 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CALCOCO2Q13137 446 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 STAT4Q14765 748 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 LRRC14Q15048 493 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 RASA2Q15283 850 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CEP55Q53EZ4 464 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 SGO2Q562F6 1265 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF618Q5T7W0 954 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CDCA2Q69YH5 1023 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CNKSR3Q6P9H4 555 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 SLC47A2Q86VL8 602 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ECHDC2Q86YB7 292 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 FITM2Q8N6M3 262 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 XXYLT1Q8NBI6 393 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 CFAP61Q8NHU2 1237 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 DENND1AQ8TEH3 1009 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 GRK7Q8WTQ7 553 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 NSMCE1Q8WV22 266 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 TCP11Q8WWU5 503 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 IFT74Q96LB3 600 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ASB2Q96Q27 587 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 TRAIPQ9BWF2 469 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 LRMDAQ9H2I8 198 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 TMEM8AQ9HCN3 771 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 ADAM22Q9P0K1 906 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 KIAA1217Q5T5P2 1943 aa8.23□□□□□ -1.09
SPIDR-223ENST00000524033 C17orf102A2RUQ5 167 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 CARNS1A5YM72 827 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 A8MUI8 341 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 DHX15O43143 795 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 PRPF4O43172 522 aaKnown RBP eCLIP8.22□□□□□ -1.091e-8■■■■■ 32.2
SPIDR-223ENST00000524033 CYP26A1O43174 497 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 CHMP2AO43633 222 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 EFCAB14O75071 495 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 CDH16O75309 829 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 SMNDC1O75940 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 UNC5CO95185 931 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ACSL3O95573 720 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ANP32DO95626 131 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ASMTLO95671 621 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 CLTAP09496 248 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 MYBL1P10243 752 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 GNAT1P11488 350 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 BRAFP15056 766 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ATF2P15336 505 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 GNAZP19086 355 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 GTF2H1P32780 548 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 MSH2P43246 934 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 YARSP54577 528 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 WDR5P61964 334 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TAP1Q03518 808 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 GRIK3Q13003 919 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 STRN3Q13033 797 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TRIM71Q2Q1W2 868 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TMEM164Q5U3C3 297 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms