RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TRIM21P19474 475 aaKnown RBP20.29■□□□□ 0.84
FBXO28-205ENST00000523990 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
FBXO28-205ENST00000523990 MAGEA9P43362 315 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 SOX9P48436 509 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 PPP3CCP48454 512 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 SLC5A3P53794 718 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 TNK2Q07912 1038 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 TAF10Q12962 218 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 FZD5Q13467 585 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 FAM3CQ92520 227 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 SLITRK1Q96PX8 696 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 SMOQ99835 787 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 ARID3AQ99856 593 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 FAM83CQ9BQN1 747 aa20.29■□□□□ 0.84
FBXO28-205ENST00000523990 THG1LQ9NWX6 298 aaKnown RBP20.29■□□□□ 0.84
FBXO28-205ENST00000523990 NDRG2Q9UN36 371 aaKnown RBP20.29■□□□□ 0.84
FBXO28-205ENST00000523990 PFKLP17858 780 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 YWHAQP27348 245 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 RPS9P46781 194 aaKnown RBP20.28■□□□□ 0.84
FBXO28-205ENST00000523990 PDE6CP51160 858 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-205ENST00000523990 STX17P56962 302 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 MTF1Q14872 753 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 CCDC40Q4G0X9 1142 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 WDR44Q5JSH3 913 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 CLEC17AQ6ZS10 378 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 SCAMP5Q8TAC9 235 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 TATDN2Q93075 761 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 HNRNPABQ99729 332 aaKnown RBP20.28■□□□□ 0.84
FBXO28-205ENST00000523990 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-205ENST00000523990 C8orf33Q9H7E9 229 aaPredicted RBP20.28■□□□□ 0.84
FBXO28-205ENST00000523990 HPS4Q9NQG7 708 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 IL37Q9NZH6 218 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 ARHGAP26Q9UNA1 814 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 KIAA1549LQ6ZVL6 1849 aa20.28■□□□□ 0.84
FBXO28-205ENST00000523990 FAM92AA1XBS5 289 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 SPECC1L-ADORA2AF8WAN1 911 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 NCAM2O15394 837 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 OLFM2O95897 454 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 OAS1P00973 400 aaKnown RBP20.27■□□□□ 0.84
FBXO28-205ENST00000523990 FAM200BP0CF97 657 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 TCF3P15923 654 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 HDCP19113 662 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 ADORA2BP29275 332 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 CTHP32929 405 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 FMO5P49326 533 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 MAP3K7CLP57077 242 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 TRIM68Q6AZZ1 485 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 C1orf228Q6PIY5 440 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 CLEC20AQ6ZU45 233 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 C1orf210Q8IVY1 113 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 TTC39CQ8N584 583 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 TTC8Q8TAM2 541 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 OVCA2Q8WZ82 227 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 FBXO32Q969P5 355 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 CYFIP2Q96F07 1278 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 GKN1Q9NS71 199 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 CISHQ9NSE2 258 aa20.27■□□□□ 0.84
FBXO28-205ENST00000523990 ZXDBP98169 803 aa20.27■□□□□ 0.83
FBXO28-205ENST00000523990 ZNF394Q53GI3 561 aa20.27■□□□□ 0.83
FBXO28-205ENST00000523990 TXNDC11Q6PKC3 985 aa20.27■□□□□ 0.83
FBXO28-205ENST00000523990 RALGPS2Q86X27 583 aaPredicted RBP20.27■□□□□ 0.83
FBXO28-205ENST00000523990 PDZD8Q8NEN9 1154 aa20.27■□□□□ 0.83
FBXO28-205ENST00000523990 EBF3Q9H4W6 596 aa20.27■□□□□ 0.83
FBXO28-205ENST00000523990 PMM2O15305 246 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 MARSP56192 900 aaKnown RBP20.26■□□□□ 0.83
FBXO28-205ENST00000523990 SLC7A9P82251 487 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 CUL2Q13617 745 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 RUNX3Q13761 415 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 ITPRIPL2Q3MIP1 535 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 CC2D1AQ6P1N0 951 aaPredicted RBP20.26■□□□□ 0.83
FBXO28-205ENST00000523990 SLC4A11Q8NBS3 891 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 SH3RF2Q8TEC5 729 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 DNAI2Q9GZS0 605 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 RNF38Q9H0F5 515 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 CLSTN2Q9H4D0 955 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 COMMD8Q9NX08 183 aa20.26■□□□□ 0.83
FBXO28-205ENST00000523990 OTOL1A6NHN0 477 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-205ENST00000523990 GNA14O95837 355 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 ABL1P00519 1130 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 NBL1P41271 181 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 MRE11P49959 708 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 RAD23BP54727 409 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 PPP1R26Q5T8A7 1209 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-205ENST00000523990 SNX30Q5VWJ9 437 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 GPRIN1Q7Z2K8 1008 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 TRIM59Q8IWR1 403 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 MAML2Q8IZL2 1156 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-205ENST00000523990 OSCP1Q8WVF1 389 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 CHFRQ96EP1 664 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 CHRDQ9H2X0 955 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 PNPLA8Q9NP80 782 aa20.25■□□□□ 0.83
FBXO28-205ENST00000523990 SPATA6Q9NWH7 488 aaPredicted RBP20.25■□□□□ 0.83
FBXO28-205ENST00000523990 HHLA1C9JL84 531 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 ZDHHC11BP0C7U3 371 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 CHRNB1P11230 501 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 ARSAP15289 507 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 PDGFRLQ15198 375 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 ALYREFQ86V81 257 aaKnown RBP20.24■□□□□ 0.83
FBXO28-205ENST00000523990 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms