RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PAX3P23760 479 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 MTMR3Q13615 1198 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 SCYL2Q6P3W7 929 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 FAM43BQ6ZT52 329 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 EP400NLQ6ZTU2 488 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 TPCN2Q8NHX9 752 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 CLSTN3Q9BQT9 956 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ZCWPW1Q9H0M4 648 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 CRISPLD1Q9H336 500 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 MSRAQ9UJ68 235 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 SCINQ9Y6U3 715 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 HIDE1A8MVS5 230 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 RFXAPO00287 272 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 XPO1O14980 1071 aaKnown RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 GRM6O15303 877 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 TEX28O15482 410 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 SRGAP2O75044 1071 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PSMA2P25787 234 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ODF2Q5BJF6 829 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 FAM171BQ6P995 826 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 XYLT1Q86Y38 959 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ZMIZ2Q8NF64 920 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ADAM32Q8TC27 787 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PIK3R5Q8WYR1 880 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ACSF2Q96CM8 615 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 FAM124BQ9H5Z6 455 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 XIRP2A4UGR9 3374 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 GRID2IPA4D2P6 1211 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PJA2O43164 708 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 CNPP09543 421 aaKnown RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PDGFRAP16234 1089 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 IRS1P35568 1242 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 SLC5A3P53794 718 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 SNX16P57768 344 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 DCAF6Q58WW2 860 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 DDX53Q86TM3 631 aaKnown RBP9.83□□□□□ -0.84
SDCBP-212ENST00000523483 KLHL11Q9NVR0 708 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 PCSK1NQ9UHG2 260 aa9.83□□□□□ -0.84
SDCBP-212ENST00000523483 ATP1A1P05023 1023 aaKnown RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 MYBL1P10243 752 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 FLT3P36888 993 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 RSRC2Q7L4I2 434 aaKnown RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 FEZF2Q8TBJ5 459 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 GDPD5Q8WTR4 605 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 CFAP57Q96MR6 1250 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 CHST7Q9NS84 486 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 MTRRQ9UBK8 725 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 INTUQ9ULD6 942 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 DSG1Q02413 1049 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 GPR17Q13304 367 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 GPM6BQ13491 265 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 C15orf59Q2T9L4 293 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF697Q5TEC3 545 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 C3orf20Q8ND61 904 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 GOLGA1Q92805 767 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 CLP1Q92989 425 aaKnown RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 TGS1Q96RS0 853 aaKnown RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 NAPGQ99747 312 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 C11orf84Q9BUA3 381 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-212ENST00000523483 TLR9Q9NR96 1032 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 ALG6Q9Y672 507 aa9.82□□□□□ -0.84
SDCBP-212ENST00000523483 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 NCAM1P13591 858 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 COMTP21964 271 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 DNAJB1P25685 340 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 CDH5P33151 784 aaPredicted RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 PTP4A2Q12974 167 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 NME3Q13232 169 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SMTNL2Q2TAL5 461 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 HFE2Q6ZVN8 426 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 GDF15Q99988 308 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 UVRAGQ9P2Y5 699 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 YJEFN3A6XGL0 299 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 E7ENQ6 273 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 KCNK3O14649 394 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 GABBR2O75899 941 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ZBED1O96006 694 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 CYP1A2P05177 515 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 FAM163BP0C2L3 166 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 PLA2G4AP47712 749 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ALDH1A3P47895 512 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 DENND5BQ6ZUT9 1274 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 RNF10Q8N5U6 811 aaKnown RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF461Q8TAF7 563 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SLC7A14Q8TBB6 771 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 RXFP2Q8WXD0 754 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 FAM161BQ96MY7 647 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ZWILCHQ9H900 591 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 AMFRQ9UKV5 643 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 FANCGO15287 622 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SDC4P31431 198 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ACADSBP45954 432 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SLC6A3Q01959 620 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 TAP1Q03518 808 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF211Q13398 564 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms