RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 TMEM35BQ8NCS4 154 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PIWIL1Q96J94 861 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 KIAA1257Q9ULG3 409 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 GOLGA8SH3BPF8 625 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 ATP8B1O43520 1251 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 LPXNO60711 386 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 IGFBP4P22692 258 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 FECHP22830 423 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 NRIP1P48552 1158 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 BCAT1P54687 386 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 BST2Q10589 180 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PDCLQ13371 301 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PTPROQ16827 1216 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 ERICH1Q86X53 443 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 SLC35F5Q8WV83 523 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 GUCA1BQ9UMX6 200 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PCDHGC3Q9UN70 934 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PCDHA13Q9Y5I0 950 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 BACE2Q9Y5Z0 518 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 RFPL2O75678 378 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 GABBR2O75899 941 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ERBB2P04626 1255 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ADH1AP07327 375 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ATF2P15336 505 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 EPCAMP16422 314 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ELF1P32519 619 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 MAGEA1P43355 309 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 GALCP54803 685 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 SLC8A3P57103 927 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 TAF5Q15542 800 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 NFE2Q16621 373 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 PKDCCQ504Y2 493 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 Q7L0L9 218 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 KIAA1328Q86T90 577 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 SLC7A14Q8TBB6 771 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 APOL5Q9BWW9 433 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 DNAI2Q9GZS0 605 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 BRWD1Q9NSI6 2320 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 ACAD10Q6JQN1 1059 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 EMILIN2Q9BXX0 1053 aa13.04□□□□□ -0.32
PABPC1-219ENST00000522387 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-219ENST00000522387 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 EIF3CLB5ME19 914 aaKnown RBP13.03□□□□□ -0.32
PABPC1-219ENST00000522387 BUB1O43683 1085 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 ATF6P18850 670 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 RRM1P23921 792 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 USP46P62068 366 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 CENPCQ03188 943 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 SPATA18Q8TC71 538 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 SLC22A17Q8WUG5 538 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 ARHGEF26Q96DR7 871 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 EIF3CQ99613 913 aaKnown RBP13.03□□□□□ -0.32
PABPC1-219ENST00000522387 TLE6Q9H808 572 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 NGRNQ9NPE2 291 aaKnown RBP13.03□□□□□ -0.32
PABPC1-219ENST00000522387 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
PABPC1-219ENST00000522387 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-219ENST00000522387 RTN2O75298 545 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 SASH3O75995 380 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 ABLIM3O94929 683 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 GLUD1P00367 558 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 ARHGAP25P42331 645 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 TKTL1P51854 596 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 SLC5A3P53794 718 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 NAP1L1P55209 391 aaKnown RBP13.02□□□□□ -0.32
PABPC1-219ENST00000522387 UBE3AQ05086 875 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 TWF1Q12792 350 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 RAB33AQ14088 237 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.32
PABPC1-219ENST00000522387 OR6B2Q6IFH4 312 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 SLC35F6Q8N357 371 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 GOLGA1Q92805 767 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 ZNF653Q96CK0 615 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 BTBD6Q96KE9 485 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 TRIM7Q9C029 511 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 LHX5Q9H2C1 402 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.322e-14■■■□□ 16.1
PABPC1-219ENST00000522387 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
PABPC1-219ENST00000522387 ENC1O14682 589 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 PGFP49763 221 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms