RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HDCP19113 662 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 CD72P21854 359 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 ARHGAP29Q52LW3 1261 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 PPM1KQ8N3J5 372 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 KAT5Q92993 513 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 KCNH6Q9H252 994 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 THAP9Q9H5L6 903 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 COMMD8Q9NX08 183 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 ARIH1Q9Y4X5 557 aaPredicted RBP21.85■■□□□ 1.09
TRIM35-203ENST00000521253 OBSL1O75147 1896 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 KMT2EQ8IZD2 1858 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 KANSL1LA0AUZ9 987 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 FAM92AA1XBS5 289 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 SHISA7A6NL88 538 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 HHLA1C9JL84 531 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 ARHGAP17Q68EM7 881 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 GPRIN1Q7Z2K8 1008 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 ARHGEF19Q8IW93 802 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 PDZD8Q8NEN9 1154 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 PRSS33Q8NF86 280 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 OVCA2Q8WZ82 227 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 JAKMIP2Q96AA8 810 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 DUSP16Q9BY84 665 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 INTS2Q9H0H0 1204 aaKnown RBP21.84■■□□□ 1.09
TRIM35-203ENST00000521253 THG1LQ9NWX6 298 aaKnown RBP21.84■■□□□ 1.09
TRIM35-203ENST00000521253 CHORDC1Q9UHD1 332 aaPredicted RBP21.84■■□□□ 1.09
TRIM35-203ENST00000521253 SIT1Q9Y3P8 196 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 PIAS3Q9Y6X2 628 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 DENND4CQ5VZ89 1909 aa21.84■■□□□ 1.09
TRIM35-203ENST00000521253 PFKLP17858 780 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 ACO1P21399 889 aaKnown RBP21.83■■□□□ 1.09
TRIM35-203ENST00000521253 MTIF2P46199 727 aaKnown RBP21.83■■□□□ 1.09
TRIM35-203ENST00000521253 PDE6CP51160 858 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 PLCB2Q00722 1185 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 CT47A1Q5JQC4 288 aaPredicted RBP21.83■■□□□ 1.09
TRIM35-203ENST00000521253 RRAGAQ7L523 313 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 PJA1Q8NG27 643 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 CSGALNACT1Q8TDX6 532 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 RNF38Q9H0F5 515 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 PNPLA8Q9NP80 782 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 GMIPQ9P107 970 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 ARHGAP26Q9UNA1 814 aa21.83■■□□□ 1.09
TRIM35-203ENST00000521253 MTF2Q9Y483 593 aaPredicted RBP21.83■■□□□ 1.09
TRIM35-203ENST00000521253 OLFM2O95897 454 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 OAS1P00973 400 aaKnown RBP21.82■■□□□ 1.08
TRIM35-203ENST00000521253 DCNP07585 359 aaKnown RBP21.82■■□□□ 1.08
TRIM35-203ENST00000521253 NUBP1P53384 320 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 GCNT1Q02742 428 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 TNK2Q07912 1038 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 UBXN2BQ14CS0 331 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 ZNF77Q15935 545 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 TMEM270Q6UE05 265 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 ZNF852Q6ZMS4 543 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 TTC16Q8NEE8 873 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 TTC8Q8TAM2 541 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 PRRX2Q99811 253 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 FAM83CQ9BQN1 747 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 CRACR2AQ9BSW2 395 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 FBXO44Q9H4M3 255 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 LTB4R2Q9NPC1 389 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 GKN1Q9NS71 199 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 GTSE1Q9NYZ3 720 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 F5P12259 2224 aa21.82■■□□□ 1.08
TRIM35-203ENST00000521253 GALR2O43603 387 aaPredicted RBP21.81■■□□□ 1.08
TRIM35-203ENST00000521253 ZDHHC11BP0C7U3 371 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 CD19P15391 556 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 PGFP49763 221 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 SLC7A9P82251 487 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 ZXDBP98169 803 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 USP4Q13107 963 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 MTF1Q14872 753 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 HSP90AA4PQ58FG1 418 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 SNX30Q5VWJ9 437 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 FAM114A1Q8IWE2 563 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 CCDC105Q8IYK2 499 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 SH3RF2Q8TEC5 729 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 KREMEN1Q96MU8 473 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 DLGAP2Q9P1A6 1054 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 PCDHB4Q9Y5E5 795 aa21.81■■□□□ 1.08
TRIM35-203ENST00000521253 COL4A2P08572 1712 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 FAM170BA6NMN3 283 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 MAN2B1O00754 1011 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 GLULP15104 373 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 TARSP26639 723 aaKnown RBP21.8■■□□□ 1.08
TRIM35-203ENST00000521253 SOX9P48436 509 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 MLLT6P55198 1093 aaPredicted RBP21.8■■□□□ 1.08
TRIM35-203ENST00000521253 TCF15Q12870 199 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 GOLGA7BQ2TAP0 167 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 SGO2Q562F6 1265 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 CCDC183Q5T5S1 534 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 TRIM68Q6AZZ1 485 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 CC2D1AQ6P1N0 951 aaPredicted RBP21.8■■□□□ 1.08
TRIM35-203ENST00000521253 TTC30AQ86WT1 665 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 ANKRD52Q8NB46 1076 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 TSPAN16Q9UKR8 245 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 KIAA1257Q9ULG3 409 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 SCML2Q9UQR0 700 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 ANAPC1Q9H1A4 1944 aa21.8■■□□□ 1.08
TRIM35-203ENST00000521253 CACNA1HO95180 2353 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 RNF225M0QZC1 329 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms