RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 A0A0U1RQJ8 604 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 SSU72P8A0A1W2PR75 194 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 PAX4O43316 350 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 MGEA5O60502 916 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 RECQL4O94761 1208 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 GFPT2O94808 682 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 LCA5LO95447 670 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 TNNC2P02585 160 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 GHRP10912 638 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 COL6A1P12109 1028 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 FERP16591 822 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 ACO1P21399 889 aaKnown RBP8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 AKAP5P24588 427 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 CD52P31358 61 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 STAT1P42224 750 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 PIK3CAP42336 1068 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 CTCFP49711 727 aaPredicted RBP8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 MYL6P60660 151 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 GCNT1Q02742 428 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 ARID5AQ03989 594 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 BIRC3Q13489 604 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 GPNMBQ14956 572 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 ARHGAP44Q17R89 818 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 SPOPLQ6IQ16 392 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 MRPL10Q7Z7H8 261 aaKnown RBP8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 NT5DC4Q86YG4 428 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 CD302Q8IX05 232 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 FAM71AQ8IYT1 594 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 CCDC170Q8IYT3 715 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 USP38Q8NB14 1042 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 ACRBPQ8NEB7 543 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 ATRIPQ8WXE1 791 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 SHC3Q92529 594 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 PPP1R13BQ96KQ4 1090 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 SPAG5Q96R06 1193 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 HAUS4Q9H6D7 363 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 DERAQ9Y315 318 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 IPPQ9Y573 584 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 PCDHB2Q9Y5E7 798 aa8.41□□□□□ -1.06
CTHRC1-203ENST00000520337 EIF3CLB5ME19 914 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ZNF623O75123 536 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 TFRCP02786 760 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 GSTP1P09211 210 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 CCDC175P0C221 793 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 HSPA1AP0DMV8 641 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 HSPA1BP0DMV9 641 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 KCNE1P15382 129 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 GUCY2FP51841 1108 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 KIF11P52732 1056 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 MFAP3P55082 362 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 NOP14P78316 857 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 PLCB3Q01970 1234 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 KLHL30Q0D2K2 578 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 PAK2Q13177 524 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 CUL2Q13617 745 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 TMEM132DQ14C87 1099 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 SGSM1Q2NKQ1 1148 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 TWF2Q6IBS0 349 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 SEZ6L2Q6UXD5 910 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 SLC39A5Q6ZMH5 540 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ENOSF1Q7L5Y1 443 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ANKRD33Q7Z3H0 272 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ZNF571Q7Z3V5 609 aaPredicted RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 RTN4RL1Q86UN2 441 aaPredicted RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 PPM1KQ8N3J5 372 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 UBR7Q8N806 425 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 SLC30A5Q8TAD4 765 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 CAGE1Q8TC20 777 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 JAKMIP2Q96AA8 810 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ANKRD36BP1Q96IX9 119 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 FAM81BQ96LP2 452 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 CCDC42Q96M95 316 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 TSPAN18Q96SJ8 248 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 EIF3CQ99613 913 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 TRIM6Q9C030 488 aaPredicted RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 DPP3Q9NY33 737 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 NENFQ9UMX5 172 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 CNTN6Q9UQ52 1028 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 BZW2Q9Y6E2 419 aaKnown RBP8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 ALPK3Q96L96 1907 aa8.4□□□□□ -1.06
CTHRC1-203ENST00000520337 BRCA2P51587 3418 aa8.4□□□□□ -1.07
CTHRC1-203ENST00000520337 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 A0A087X0T9 212 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 SMIM28A0A1B0GU29 152 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM170BA6NMN3 283 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 MEIS3P2A8K0S8 358 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 TMPRSS2O15393 492 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 ITGB3P05106 788 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 TMEM191BP0C7N4 346 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM228BP0C875 321 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 CHRNB2P17787 502 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 MAPK1P28482 360 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 CYLC1P35663 651 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 ARHGAP25P42331 645 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 GJA8P48165 433 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 YARSP54577 528 aaKnown RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 GFPT1Q06210 699 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms