RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 ARMC6Q6NXE6 501 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 NFRKBQ6P4R8 1299 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 GLB1LQ6UWU2 654 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 Q6ZRM9 215 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 Q6ZSN1 163 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 TTC30AQ86WT1 665 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 ADGRG5Q8IZF4 528 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 SIMC1Q8NDZ2 872 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 OR6Y1Q8NGX8 325 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 SCAMP5Q8TAC9 235 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 WDR60Q8WVS4 1066 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 SNX19Q92543 992 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 GBA2Q9HCG7 927 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 RIC8AQ9NPQ8 531 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 FEM1BQ9UK73 627 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 NFU1Q9UMS0 254 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 COL15A1P39059 1388 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 MARCH11A6NNE9 402 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 GRXCR1A8MXD5 290 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 B9A039 149 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 SNX2O60749 519 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 TK1P04183 234 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 ELANEP08246 267 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 RBL1P28749 1068 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 EPHA3P29320 983 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 MAN1A1P33908 653 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 SCNN1GP51170 649 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 PGDP52209 483 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 GEMIN4P57678 1058 aaKnown RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 ACTR2P61160 394 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 CXADRP78310 365 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 FPGSQ05932 587 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 TUBB3Q13509 450 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 CLCA4Q14CN2 919 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 RBM20Q5T481 1227 aaKnown RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 B3GNTL1Q67FW5 361 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 SP5Q6BEB4 398 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 RETSATQ6NUM9 610 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 TMTC1Q8IUR5 882 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 TMEM132CQ8N3T6 1108 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZNF808Q8N4W9 903 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 ASB12Q8WXK4 309 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 EDAQ92838 391 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 WDR24Q96S15 920 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 SEC62Q99442 399 aaKnown RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 SSBP3Q9BWW4 388 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 INO80BQ9C086 356 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 RASSF1Q9NS23 344 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 TMEM74BQ9NUR3 256 aa6.11□□□□□ -1.43
HMGB1P46-201ENST00000520062 EFCAB8A8MWE9 144 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 F5H697 171 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 J3KTA2 159 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZSCAN9O15535 394 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 HOXC11O43248 304 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 PRKCBP05771 671 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 GYS1P13807 737 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 HGFP14210 728 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 CFPP27918 469 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 UQCRC1P31930 480 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 AARSP49588 968 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 MCM2P49736 904 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZNF124Q15973 351 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 CYP2A13Q16696 494 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 TTC22Q5TAA0 569 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 WDR78Q5VTH9 848 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 RINT1Q6NUQ1 792 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 TRAPPC9Q96Q05 1148 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 HIST1H2AAQ96QV6 131 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 TAF1DQ9H5J8 278 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 EPS8L2Q9H6S3 715 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 TRIM36Q9NQ86 728 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 MAP3K20Q9NYL2 800 aaKnown RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 TRPM5Q9NZQ8 1165 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 SWAP70Q9UH65 585 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 DAPP1Q9UN19 280 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 C19orf53Q9UNZ5 99 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 SSX2IPQ9Y2D8 614 aa6.1□□□□□ -1.43
HMGB1P46-201ENST00000520062 PNMA6EA0A0J9YXQ4 647 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 ADM5C9JUS6 153 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 H0Y3Z8 333 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZFPL1O95159 310 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 XBP1P17861 261 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 HIBADHP31937 336 aaKnown RBP6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 GATMP50440 423 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 PRKAA2P54646 552 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 VAMP2P63027 116 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 ADAM17P78536 824 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 CUL4BQ13620 913 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 CSHL1Q14406 222 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 SPDYE7PQ495Y7 208 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms