RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 CXCL12P48061 93 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 KPNA1P52294 538 aaPredicted RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 PMS1P54277 932 aaKnown RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 KRT85P78386 507 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CYP27A1Q02318 531 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 INCA1Q0VD86 236 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TAF10Q12962 218 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NCOA4Q13772 614 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 KCNB1Q14721 858 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SNX30Q5VWJ9 437 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 C1orf228Q6PIY5 440 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ZC3H14Q6PJT7 736 aaKnown RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 HS2ST1Q7LGA3 356 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 YAF2Q8IY57 180 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 FMR1NBQ8N0W7 255 aaPredicted RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CRYBG2Q8N1P7 616 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 C12orf29Q8N999 325 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 OR6B3Q8NGW1 331 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SPATA20Q8TB22 786 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TMC2Q8TDI7 906 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TAS1R2Q8TE23 839 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 MRPS31Q92665 395 aaKnown RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SEMA4DQ92854 862 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SPATA32Q96LK8 384 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 FNBP1Q96RU3 617 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 MMS19Q96T76 1030 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 FAM126AQ9BYI3 521 aaPredicted RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 USP25Q9UHP3 1055 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 MAPK8IP1Q9UQF2 711 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TMEM131Q92545 1883 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NUMA1Q14980 2115 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 DOCK9Q9BZ29 2069 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TRAV19A0A0A6YYK7 116 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 A8MXQ7 604 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 DPYSL4O14531 572 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 IKBKBO14920 756 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TRIM66O15016 1216 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 COCHO43405 550 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 HLA-DRAP01903 254 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CKMP06732 381 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 USP17L7P0C7H9 530 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 PFKLP17858 780 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 HDCP19113 662 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 BMP6P22004 513 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NR2F2P24468 414 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 AVPR1AP37288 418 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 GRIK1P39086 918 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SLC6A11P48066 632 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NDST1P52848 882 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ENPEPQ07075 957 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 PNOCQ13519 176 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 LRRC32Q14392 662 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 PDGFRLQ15198 375 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 LPAL2Q16609 132 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ZNF699Q32M78 642 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ZNF667Q5HYK9 610 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 RHBDF2Q6PJF5 856 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SCARA5Q6ZMJ2 495 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CLEC20AQ6ZU45 233 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ACOT1Q86TX2 421 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CEP57L1Q8IYX8 460 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ADGRG2Q8IZP9 1017 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NUP93Q8N1F7 819 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SYNPOQ8N3V7 929 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 GUF1Q8N442 669 aaKnown RBP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 UBR7Q8N806 425 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 FSIP1Q8NA03 581 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 GOLGA5Q8TBA6 731 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ERCC4Q92889 916 aaPredicted RBP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 SYAP1Q96A49 352 aaPredicted RBP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 EEF2KMTQ96G04 330 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 GCNAQ96QF7 691 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CCSER2Q9H7U1 834 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 NMUR1Q9HB89 426 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CD248Q9HCU0 757 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 TRPC7Q9HCX4 862 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 EXOC1Q9NV70 894 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 DUS2Q9NX74 493 aaKnown RBP6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CPQQ9Y646 472 aa6.53□□□□□ -1.36
IGKV3D-25-201ENST00000519599 CNOT1A5YKK6 2376 aaKnown RBP6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 PCNX2A6NKB5 2137 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 TULP1O00294 542 aaPredicted RBP6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 TRIM24O15164 1050 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 CILPO75339 1184 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 GABBR2O75899 941 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 CD44P16070 742 aaKnown RBP6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 PRCPP42785 496 aa6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 KIR2DL1P43626 348 aaPredicted RBP6.52□□□□□ -1.37
IGKV3D-25-201ENST00000519599 GCLMP48507 274 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms