RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	SLC38A8	A6NNN8	435 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534		M0QYV0	167 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZNF197	O14709	1029 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	GLI1	P08151	1106 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	MME	P08473	750 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	SPATA31D3	P0C874	917 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	HMGA1	P17096	107 aa	Known RBP	11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	MMP8	P22894	467 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	YWHAQ	P27348	245 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CACNA2D1	P54289	1103 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	GSC	P56915	257 aa	Predicted RBP	11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	NOMO3	P69849	1222 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	TAF12	Q16514	161 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	SLC18A3	Q16572	532 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CCDC142	Q17RM4	750 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CLEC16A	Q2KHT3	1053 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CYP4A22	Q5TCH4	519 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	E4F1	Q66K89	784 aa	Predicted RBP	11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ACAD10	Q6JQN1	1059 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CES5A	Q6NT32	575 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	PMF1	Q6P1K2	205 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	DENND1B	Q6P3S1	775 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	SYCE2	Q6PIF2	218 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	SPATA31D4	Q6ZUB0	917 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ARC	Q7LC44	396 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CCDC186	Q7Z3E2	898 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	MON1A	Q86VX9	555 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	NLRC5	Q86WI3	1866 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ARHGAP18	Q8N392	663 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	C1orf131	Q8NDD1	294 aa	Known RBP	11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CCDC112	Q8NEF3	446 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	UBA3	Q8TBC4	463 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	HLA-C	Q95604	372 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZNF707	Q96C28	371 aa	Predicted RBP	11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	PPP1R13B	Q96KQ4	1090 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	CCDC42	Q96M95	316 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	NECTIN4	Q96NY8	510 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	TRIM62	Q9BVG3	475 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	LRRC3	Q9BY71	257 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ISCU	Q9H1K1	167 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	LRRC4	Q9HBW1	653 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	TMEM30A	Q9NV96	361 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ASNSD1	Q9NWL6	643 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	WDR35	Q9P2L0	1181 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	ADAMTS1	Q9UHI8	967 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	STRIP2	Q9ULQ0	834 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	TRANK1	O15050	2925 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	VWA8	A3KMH1	1905 aa		11.39	□□□□□ -0.59
CHTF8-206	ENST00000519534	DDX3X	O00571	662 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	3e-14	■■■■□ 21.3
CHTF8-206	ENST00000519534	RTN2	O75298	545 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	RFPL2	O75678	378 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	LCA5L	O95447	670 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZDHHC11B	P0C7U3	371 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	MYBL1	P10243	752 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SKIL	P12757	684 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	DDX6	P26196	483 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	3e-6	■■■□□ 17.3
CHTF8-206	ENST00000519534	WEE1	P30291	646 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	MTHFR	P42898	656 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SLC5A3	P53794	718 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	PDCL	Q13371	301 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZNF268	Q14587	947 aa	Predicted RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	TDRD12	Q587J7	1177 aa	Known RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	LLGL2	Q6P1M3	1020 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	ERICH1	Q86X53	443 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	TTC9B	Q8N6N2	239 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SMRP1	Q8NCR6	262 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SLC20A1	Q8WUM9	679 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	C18orf8	Q96DM3	657 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	TRIM11	Q96F44	468 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	RIPOR3	Q96MK2	946 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SLITRK1	Q96PX8	696 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	PCDHB18P	Q96TA0	734 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	BAG1	Q99933	345 aa	Predicted RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	WDR6	Q9NNW5	1121 aa	Known RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	CLDND1	Q9NY35	253 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	CLIC5	Q9NZA1	410 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	PLXNA4	Q9HCM2	1894 aa		11.38	□□□□□ -0.59
CHTF8-206	ENST00000519534	SPDYE4	A6NLX3	237 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	LINC01565	O15544	149 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	NRDC	O43847	1150 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	CSPG5	O95196	566 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	ZBED1	O96006	694 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	F11	P03951	625 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	CALB1	P05937	261 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	CFH	P08603	1231 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	CDC25C	P30307	473 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	EIF4A3	P38919	411 aa	Known RBP	11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	NSF	P46459	744 aa	Known RBP	11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	TUB	P50607	506 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	TKTL1	P51854	596 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	CCDC173	Q0VFZ6	552 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	EFHC1	Q5JVL4	640 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	TAF3	Q5VWG9	929 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	ALKBH5	Q6P6C2	394 aa	Known RBP	11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	KLHDC10	Q6PID8	442 aa		11.37	□□□□□ -0.59
CHTF8-206	ENST00000519534	LRRC8A	Q8IWT6	810 aa		11.37	□□□□□ -0.59

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