RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 RIPK2O43353 540 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 ITGAVP06756 1048 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 CHKAP35790 457 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 RAB6CQ53S08 254 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 EMC10Q5UCC4 262 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 TRMT10CQ7L0Y3 403 aaKnown RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 SLC2A14Q8TDB8 520 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 GAD1Q99259 594 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 B3GNT5Q9BYG0 378 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 FRMD8P1Q9BZ68 369 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 RAB6CQ9H0N0 254 aa27.82■■■□□ 2.04
COL13A1-210ENST00000517713 AGO3Q9H9G7 860 aaKnown RBP27.82■■■□□ 2.04
COL13A1-210ENST00000517713 PRPSAP2O60256 369 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 CST5P28325 142 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-210ENST00000517713 PLCB3Q01970 1234 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 CYP4V2Q6ZWL3 525 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-210ENST00000517713 SLC35B2Q8TB61 432 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 LPPQ93052 612 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 LRRC4CQ9HCJ2 640 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 CYLDQ9NQC7 956 aa27.81■■■□□ 2.04
COL13A1-210ENST00000517713 KIF3CO14782 793 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 THP07101 528 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 FAM163BP0C2L3 166 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 SDC4P31431 198 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 ACTN2P35609 894 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 RPL34P49207 117 aaKnown RBP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 ATP11AP98196 1134 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 HOOK3Q86VS8 718 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 RFX6Q8HWS3 928 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 B3GALNT2Q8NCR0 500 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 OTUD4Q01804 1114 aaKnown RBP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 P3H1Q32P28 736 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 UBAP2Q5T6F2 1119 aaKnown RBP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 LEKR1Q6ZMV7 388 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 GLIS1Q8NBF1 620 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 PCSK9Q8NBP7 692 aaKnown RBP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 ACTL9Q8TC94 416 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 CALN1Q9BXU9 219 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 RSAD1Q9HA92 442 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 SAE1Q9UBE0 346 aaPredicted RBP27.8■■■□□ 2.04
COL13A1-210ENST00000517713 GIT1Q9Y2X7 761 aa27.8■■■□□ 2.04
COL13A1-210ENST00000517713 DESP17661 470 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ACADSBP45954 432 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ATP1A2P50993 1020 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ARSEP51690 589 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 FAM172AQ8WUF8 416 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 TMEM121Q9BTD3 319 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 OSBPL7Q9BZF2 842 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 CDC42EP4Q9H3Q1 356 aaKnown RBP27.79■■■□□ 2.04
COL13A1-210ENST00000517713 MIOSQ9NXC5 875 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 PADI3Q9ULW8 664 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ENDOD1O94919 500 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ZSCAN5DPP0CG00 497 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 LCP1P13796 627 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 AFF1P51825 1210 aaKnown RBP27.79■■■□□ 2.04
COL13A1-210ENST00000517713 CDH6P55285 790 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 WSCD1Q658N2 575 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 HIBCHQ6NVY1 386 aaPredicted RBP27.79■■■□□ 2.04
COL13A1-210ENST00000517713 HSFY1Q96LI6 401 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 NGRNQ9NPE2 291 aaKnown RBP27.79■■■□□ 2.04
COL13A1-210ENST00000517713 CACNG4Q9UBN1 327 aa27.79■■■□□ 2.04
COL13A1-210ENST00000517713 ARL5CA6NH57 179 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 ETS1P14921 441 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 IGFBP6P24592 240 aaPredicted RBP27.78■■■□□ 2.04
COL13A1-210ENST00000517713 TKTP29401 623 aaKnown RBP27.78■■■□□ 2.04
COL13A1-210ENST00000517713 CD52P31358 61 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 SCNN1AP37088 669 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 AGMOQ6ZNB7 445 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 MRPL10Q7Z7H8 261 aaKnown RBP27.78■■■□□ 2.04
COL13A1-210ENST00000517713 CLEC4CQ8WTT0 213 aa27.78■■■□□ 2.04
COL13A1-210ENST00000517713 HNRNPABQ99729 332 aaKnown RBP27.78■■■□□ 2.04
COL13A1-210ENST00000517713 NOVA2Q9UNW9 492 aaKnown RBP27.78■■■□□ 2.04
COL13A1-210ENST00000517713 A6NNZ2 444 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 SGK1O00141 431 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 ATP2C2O75185 946 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 TUBB8Q3ZCM7 444 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 BOLA3Q53S33 107 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 SCYL2Q6P3W7 929 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 SLC26A9Q7LBE3 791 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 SENP8Q96LD8 212 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 NCAPGQ9BPX3 1015 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 MAK16Q9BXY0 300 aaKnown RBP27.77■■■□□ 2.04
COL13A1-210ENST00000517713 DNALI1O14645 258 aaPredicted RBP27.77■■■□□ 2.04
COL13A1-210ENST00000517713 GABRDO14764 452 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 CAPN15O75808 1086 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 GHRP10912 638 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 PTPN1P18031 435 aaKnown RBP27.77■■■□□ 2.04
COL13A1-210ENST00000517713 IRAK1P51617 712 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 SKIDA1Q1XH10 827 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 UHMK1Q8TAS1 419 aaKnown RBP27.77■■■□□ 2.04
COL13A1-210ENST00000517713 ADAM7Q9H2U9 754 aa27.77■■■□□ 2.04
COL13A1-210ENST00000517713 APOC4-APOC2K7ER74 178 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 XPO1O14980 1071 aaKnown RBP27.76■■■□□ 2.03
COL13A1-210ENST00000517713 CAND2O75155 1236 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 APOC2P02655 101 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 ACAT1P24752 427 aaKnown RBP27.76■■■□□ 2.03
COL13A1-210ENST00000517713 HPDP32754 393 aaPredicted RBP27.76■■■□□ 2.03
COL13A1-210ENST00000517713 CLCNKBP51801 687 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 GNGT1P63211 74 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms