RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ASAH2Q9NR71 780 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 COL20A1Q9P218 1284 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 PISDQ9UG56 409 aa3.55□□□□□ -1.84
SCARNA13-201ENST00000516672 RP1P56715 2156 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ZBTB24O43167 697 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 RFPL1O75677 317 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SURF6O75683 361 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 GABBR2O75899 941 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 POMCP01189 267 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 NR3C2P08235 984 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 STSP08842 583 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 INSRRP14616 1297 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 EIF2AK2P19525 551 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 MSX1P28360 303 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 OR1D2P34982 312 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 TNFSF9P41273 254 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 PHKA2P46019 1235 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 AFF1P51825 1210 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 PDX1P52945 283 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 NKX6-1P78426 367 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 FOXM1Q08050 763 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF211Q13398 564 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 HDAC1Q13547 482 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 PLCB4Q15147 1175 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SYCP1Q15431 976 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 C16orf46Q6P387 395 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 METTL7BQ6UX53 244 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 C16orf86Q6ZW13 317 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 RAB11FIP2Q7L804 512 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 TRMT1LQ7Z2T5 733 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 RD3Q7Z3Z2 195 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ELMOD1Q8N336 334 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 CPA6Q8N4T0 437 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 IL22RA1Q8N6P7 574 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 C3orf56Q8N813 242 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ACBD4Q8NC06 268 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 RGS22Q8NE09 1264 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SYTL5Q8TDW5 730 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 USP7Q93009 1102 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 CHMP4CQ96CF2 233 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SLC45A3Q96JT2 553 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 TNIP3Q96KP6 325 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF512Q96ME7 567 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 TREX2Q9BQ50 279 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 RIOK1Q9BRS2 568 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 INTS2Q9H0H0 1204 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 GZF1Q9H116 711 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 DCTPP1Q9H773 170 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ECT2Q9H8V3 914 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 DCP1AQ9NPI6 582 aaPredicted RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF358Q9NW07 568 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 DNAJB12Q9NXW2 375 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SUCOQ9UBS9 1254 aaKnown RBP3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 SYNPO2Q9UMS6 1093 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 TNNQ9UQP3 1299 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 KCTD3Q9Y597 815 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 CNTRLQ7Z7A1 2325 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 DOCK5Q9H7D0 1870 aa3.54□□□□□ -1.84
SCARNA13-201ENST00000516672 CYP2D7A0A087X1C5 515 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 IGKV6D-41A0A0C4DH26 115 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 PNMA6EA0A0J9YXQ4 647 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 TBC1D3BA6NDS4 549 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 PRRG1O14668 218 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 OPLAHO14841 1288 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 PIN1P1O15428 100 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 LRCH4O75427 683 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 UQCRFS1P1P0C7P4 283 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 JMJD7P0C870 316 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CKMT1AP12532 417 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 HOXB2P14652 356 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CIITAP33076 1130 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 GGT5P36269 586 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 SLC1A4P43007 532 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KIR2DL1P43626 348 aaPredicted RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ARRB1P49407 418 aaPredicted RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 PGDP52209 483 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 SP4Q02446 784 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KRTAP1-1Q07627 177 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 LAMB3Q13751 1172 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 SNTB1Q13884 538 aaKnown RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 C20orf194Q5TEA3 1177 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ARHGEF16Q5VV41 709 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 SHEQ5VZ18 495 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 SLC6A19Q695T7 634 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KIAA1324Q6UXG2 1013 aaKnown RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 RNF19BQ6ZMZ0 732 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KCTD1Q719H9 257 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ZNF765Q7L2R6 523 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CYFIP1Q7L576 1253 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CEP57Q86XR8 500 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 COLGALT2Q8IYK4 626 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KIAA0319LQ8IZA0 1049 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 LEMD2Q8NC56 503 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 IFI44Q8TCB0 444 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 GPBAR1Q8TDU6 330 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 NLRP7Q8WX94 980 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 WASF1Q92558 559 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 TBC1D5Q92609 795 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 KIF1BPQ96EK5 621 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 GMCL1Q96IK5 515 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms