RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 FBXO43Q4G163 708 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 LAIR1Q6GTX8 287 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 INTS8Q75QN2 995 aaKnown RBP18.58■□□□□ 0.56
DDX41-217ENST00000515562 SV2AQ7L0J3 742 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 ERMP1Q7Z2K6 904 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 NUP93Q8N1F7 819 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 GUF1Q8N442 669 aaKnown RBP18.58■□□□□ 0.56
DDX41-217ENST00000515562 OVCA2Q8WZ82 227 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 SMARCD1Q96GM5 515 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 MED10Q9BTT4 135 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 IMPG2Q9BZV3 1241 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 GOLPH3LQ9H4A5 285 aa18.58■□□□□ 0.56
DDX41-217ENST00000515562 DMAP1Q9NPF5 467 aaPredicted RBP18.58■□□□□ 0.56
DDX41-217ENST00000515562 CHURC1-FNTBB4DL54 471 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 ZNF202O95125 648 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 OAS1P00973 400 aaKnown RBP18.57■□□□□ 0.56
DDX41-217ENST00000515562 KRT13P13646 458 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 YWHAQP27348 245 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 FNTBP49356 437 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 VAMP7P51809 220 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 IFRD2Q12894 506 aaPredicted RBP18.57■□□□□ 0.56
DDX41-217ENST00000515562 DDX42Q86XP3 938 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDX41-217ENST00000515562 SDCBP2Q9H190 292 aa18.57■□□□□ 0.56
DDX41-217ENST00000515562 WDR87Q6ZQQ6 2873 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 LEFTY2O00292 366 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 RNF40O75150 1001 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 AKAP3O75969 853 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 ABL1P00519 1130 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 EGFP01133 1207 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 ASPAP45381 313 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 DMWDQ09019 674 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 SIM2Q14190 667 aaPredicted RBP18.56■□□□□ 0.56
DDX41-217ENST00000515562 BECN1Q14457 450 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 PRR23BQ6ZRT6 265 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 FAM186BQ8IYM0 893 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 CCDC26Q8TAB7 109 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 CD101Q93033 1021 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 FBXO32Q969P5 355 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 KRT82Q9NSB4 513 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 C2orf42Q9NWW7 574 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 MAPK8IP1Q9UQF2 711 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 CPQQ9Y646 472 aa18.56■□□□□ 0.56
DDX41-217ENST00000515562 DCHS1Q96JQ0 3298 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 SLC9A3R1O14745 358 aaPredicted RBP18.55■□□□□ 0.56
DDX41-217ENST00000515562 AP1G2O75843 785 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 HLA-DRAP01903 254 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 PSMC2P35998 433 aaKnown RBP18.55■□□□□ 0.56
DDX41-217ENST00000515562 GALK1P51570 392 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 NDST1P52848 882 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 SLC5A3P53794 718 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 C1orf220Q5T0J3 134 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 HEATR6Q6AI08 1181 aaKnown RBP18.55■□□□□ 0.56
DDX41-217ENST00000515562 PKN3Q6P5Z2 889 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 ACOT1Q86TX2 421 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 WDR5BQ86VZ2 330 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 FUKQ8N0W3 1084 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 ELMO3Q96BJ8 720 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 RMDN1Q96DB5 314 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 KCNK16Q96T55 309 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 RNF38Q9H0F5 515 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 GDPD2Q9HCC8 539 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 COMMD8Q9NX08 183 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 SLC8A2Q9UPR5 921 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 DMXL1Q9Y485 3027 aa18.55■□□□□ 0.56
DDX41-217ENST00000515562 CCDC163A0A0D9SF12 145 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 TUBP50607 506 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 ZXDBP98169 803 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 LMNB2Q03252 620 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 INCA1Q0VD86 236 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 EDRF1Q3B7T1 1238 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 ZCWPW2Q504Y3 356 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 PAQR9Q6ZVX9 377 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.54■□□□□ 0.56
DDX41-217ENST00000515562 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 CCDC150Q8NCX0 1101 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 ACDQ96AP0 544 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 DNAI2Q9GZS0 605 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 LINC00597Q9H2U6 94 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 FBRSL1Q9HCM7 1045 aaKnown RBP18.54■□□□□ 0.56
DDX41-217ENST00000515562 RMND1Q9NWS8 449 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 SMPD4Q9NXE4 827 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 HMGXB4Q9UGU5 601 aa18.54■□□□□ 0.56
DDX41-217ENST00000515562 TNFRSF10BO14763 440 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 HRO43593 1189 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 LRP3O75074 770 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 RETP07949 1114 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 TRIM49P0CI25 452 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 TRIM49CP0CI26 452 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 MBL2P11226 248 aaPredicted RBP18.53■□□□□ 0.56
DDX41-217ENST00000515562 CCDC130P13994 396 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 SDHBP21912 280 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 GCLMP48507 274 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 ADAM9Q13443 819 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 PUM1Q14671 1186 aaKnown RBP eCLIP18.53■□□□□ 0.564e-10■□□□□ 9.2
DDX41-217ENST00000515562 LPAL2Q16609 132 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 SNX30Q5VWJ9 437 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 NAIF1Q69YI7 327 aaPredicted RBP18.53■□□□□ 0.56
DDX41-217ENST00000515562 SPOPLQ6IQ16 392 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms