RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 UBA3Q8TBC4 463 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
SUB1-213ENST00000515355 CSGALNACT1Q8TDX6 532 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 E2F7Q96AV8 911 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 MYRFLQ96LU7 910 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 SLC22A12Q96S37 553 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 NACA2Q9H009 215 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 VPS16Q9H269 839 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 ARHGEF3Q9NR81 526 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 FANCLQ9NW38 375 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 SMPD4Q9NXE4 827 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 WNT16Q9UBV4 365 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 CCL26Q9Y258 94 aa12.19□□□□□ -0.46
SUB1-213ENST00000515355 KRBA1A5PL33 1030 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 PMM2O15305 246 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 TPM2P07951 284 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 USP17L7P0C7H9 530 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 NPR3P17342 541 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 COL9A1P20849 921 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 CD72P21854 359 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 KPNA1P52294 538 aaPredicted RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 TCP11X2Q5H9J9 407 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 CLEC20AQ6ZU45 233 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 GPRIN1Q7Z2K8 1008 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 FBXL6Q8N531 539 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 CELF5Q8N6W0 485 aaKnown RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 RBBP8NLQ8NC74 664 aaPredicted RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 LMO3Q8TAP4 145 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 BPIFB1Q8TDL5 484 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 DEPDC1BQ8WUY9 529 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 IRF7Q92985 503 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 USP13Q92995 863 aaPredicted RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 CEP295NLQ96MC4 621 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 TDP1Q9NUW8 608 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 THG1LQ9NWX6 298 aaKnown RBP12.18□□□□□ -0.46
SUB1-213ENST00000515355 GMIPQ9P107 970 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 HESX1Q9UBX0 185 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 TSPAN16Q9UKR8 245 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
SUB1-213ENST00000515355 NCANO14594 1321 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 ZNF840PA6NDX5 716 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 RNF225M0QZC1 329 aaPredicted RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 CYP26A1O43174 497 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 MBL2P11226 248 aaPredicted RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 VDRP11473 427 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 NUBP1P53384 320 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 MFAP3P55082 362 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 UBXN2BQ14CS0 331 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 MLF2Q15773 248 aaPredicted RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 AOPEPQ8N6M6 819 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 ANKRD20A12PQ8NF67 263 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 SHDQ96IW2 340 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 KREMEN1Q96MU8 473 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 TTLL2Q9BWV7 592 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
SUB1-213ENST00000515355 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 TBC1D17Q9HA65 648 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 TRPV4Q9HBA0 871 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 SLC2A4RGQ9NR83 387 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 ZMYM5Q9UJ78 669 aa12.17□□□□□ -0.46
SUB1-213ENST00000515355 SYCE3A1L190 88 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 M0QYV0 167 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 PIK3R2O00459 728 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
SUB1-213ENST00000515355 IRF1P10914 325 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 PON1P27169 355 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 PPP3CCP48454 512 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 PDE6CP51160 858 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
SUB1-213ENST00000515355 MYL5Q02045 173 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 GCNT1Q02742 428 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 ARHGAP17Q68EM7 881 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 ANKRD52Q8NB46 1076 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 PDZD8Q8NEN9 1154 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 SH3RF2Q8TEC5 729 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 LSM14BQ9BX40 385 aaKnown RBP12.16□□□□□ -0.46
SUB1-213ENST00000515355 FOXQ1Q9C009 403 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
SUB1-213ENST00000515355 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms