RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 PGK2P07205 417 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 ATP6V1B2P21281 511 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 ACAD10Q6JQN1 1059 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 ATXN2LQ8WWM7 1075 aaKnown RBP13.76□□□□□ -0.21
TCOF1-214ENST00000515035 ELP3Q9H9T3 547 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 SELENONQ9NZV5 590 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
TCOF1-214ENST00000515035 SLC26A4O43511 780 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 DPEP1P16444 411 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 TGM2P21980 687 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 RBP5P82980 135 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 KYAT1Q16773 422 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 APPL2Q8NEU8 664 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ZNF512BQ96KM6 892 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ROGDIQ9GZN7 287 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 RAD21L1Q9H4I0 556 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ATAD3AQ9NVI7 634 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 POLRMTO00411 1230 aaKnown RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 TM9SF1O15321 606 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 H2AFYO75367 372 aaKnown RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 GTF2H1P32780 548 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 PDPK2PQ6A1A2 396 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 NAALADL1Q9UQQ1 740 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 PSMB9P28065 219 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 CDC25CP30307 473 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 RAD23AP54725 363 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 EFHBQ8N7U6 833 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ZNF70Q9UC06 446 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 TMEM191CA6NGB0 347 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 FCGR1AP12314 374 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 SLC26A11Q86WA9 606 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 PPP1R2P1Q96PQ5 205 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-214ENST00000515035 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
TCOF1-214ENST00000515035 ZSCAN5CA6NGD5 496 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 FCHO1O14526 889 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 MTSS1O43312 755 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 PPP3CCP48454 512 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 NPEPPSP55786 919 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 ELF3P78545 371 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 TAF1CQ15572 869 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 AGAP9Q5VTM2 703 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 KYQ8NBH2 561 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SOAT2O75908 522 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SERPIND1P05546 499 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SNAPC2Q13487 334 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 NFYCQ13952 458 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 TKFCQ3LXA3 575 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 TBCELQ5QJ74 424 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SNX31Q8N9S9 440 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 JPH1Q9HDC5 661 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 HPS5Q9UPZ3 1129 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 PREPLQ4J6C6 727 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 BOLA3Q53S33 107 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 PTRHD1Q6GMV3 140 aaKnown RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 C19orf18Q8NEA5 215 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 ASZ1Q8WWH4 475 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 USP13Q92995 863 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 TMEM143Q96AN5 459 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 OSBPL10Q9BXB5 764 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-214ENST00000515035 RHOBTB1O94844 696 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 CAPN1P07384 714 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 HSMCR30P0CW71 290 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SOAT1P35610 550 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 NME5P56597 212 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 ZNF844Q08AG5 666 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 C11orf63Q6NUN7 778 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 C11orf74Q86VG3 221 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 LRRC39Q96DD0 335 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 APOL5Q9BWW9 433 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 IL25Q9H293 177 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 SENP2Q9HC62 589 aa13.74□□□□□ -0.21
TCOF1-214ENST00000515035 FLT1P17948 1338 aa13.73□□□□□ -0.21
TCOF1-214ENST00000515035 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
TCOF1-214ENST00000515035 MED26O95402 600 aa13.73□□□□□ -0.21
TCOF1-214ENST00000515035 PON1P27169 355 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms