RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 RBP3P10745 1247 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CREB1P16220 341 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 KRT15P19012 456 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 AXLP30530 894 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SCNN1AP37088 669 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CDH6P55285 790 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 RNASELQ05823 741 aaKnown RBP15.53■□□□□ 0.08
NUP54-217ENST00000514987 GRB14Q14449 540 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SPARCL1Q14515 664 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 GOLGA7BQ2TAP0 167 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 NUGGCQ68CJ6 796 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 FAM183BPQ6ZVS7 135 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SPATA21Q7Z572 469 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SPATA18Q8TC71 538 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.53■□□□□ 0.08
NUP54-217ENST00000514987 KAT2BQ92831 832 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TGS1Q96RS0 853 aaKnown RBP15.53■□□□□ 0.08
NUP54-217ENST00000514987 PPP1R16BQ96T49 567 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SLC4A5Q9BY07 1137 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TRABDQ9H4I3 376 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CYLDQ9NQC7 956 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CCL15-CCL14A0A0B4J2E2 113 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 BTBD19C9JJ37 291 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 E5RJQ4 531 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 POC1B-GALNT4F8VUJ3 575 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SPAG6O75602 509 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
NUP54-217ENST00000514987 NPTXRO95502 500 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TGM2P21980 687 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 GCAP28676 217 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SLC6A3Q01959 620 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 ACVR2BQ13705 512 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 MPP2Q14168 576 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 KRT81Q14533 505 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CCL15Q16663 113 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 DARS2Q6PI48 645 aaKnown RBP15.53■□□□□ 0.08
NUP54-217ENST00000514987 RGS9BPQ6ZS82 235 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 TMEM110Q86TL2 294 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 MAML3Q96JK9 1138 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 SNX27Q96L92 541 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 RNF157Q96PX1 679 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 ADAMTS10Q9H324 1103 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.53■□□□□ 0.08
NUP54-217ENST00000514987 FGFR1OP2Q9NVK5 253 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 HAUS2Q9NVX0 235 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 KAT6AQ92794 2004 aa15.53■□□□□ 0.08
NUP54-217ENST00000514987 CFAP73A6NFT4 308 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 XPOTO43592 962 aaKnown RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 RASSF9O75901 435 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 PFKMP08237 780 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 CD48P09326 243 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 SMPD1P17405 629 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 CYP3A5P20815 502 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 SDC4P31431 198 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 HNRNPH1P31943 449 aaKnown RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 GBP2P32456 591 aaPredicted RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 FKBP1BP68106 108 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 XRCC4Q13426 336 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 DPYSL3Q14195 570 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 FASTKD3Q14CZ7 662 aaKnown RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 ZBTB6Q15916 424 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 PKDCCQ504Y2 493 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 FBXW10Q5XX13 1052 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 ARHGAP17Q68EM7 881 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 DPH6Q7L8W6 267 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 ARCQ7LC44 396 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 CATSPER4Q7RTX7 472 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 GPR142Q7Z601 462 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 PLEKHH3Q7Z736 793 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 UNC45BQ8IWX7 931 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 PALM2Q8IXS6 379 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 TINF2Q9BSI4 451 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 ACSS3Q9H6R3 686 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 PAK5Q9P286 719 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 SAE1Q9UBE0 346 aaPredicted RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 XPO7Q9UIA9 1087 aaKnown RBP15.52■□□□□ 0.07
NUP54-217ENST00000514987 NRCAMQ92823 1304 aa15.52■□□□□ 0.07
NUP54-217ENST00000514987 SMIM35A0A1B0GVV1 85 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 SLC15A5A6NIM6 579 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 MDM4O15151 490 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 CHADO15335 359 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 CD4P01730 458 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 GDF10P55107 478 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 MTFR1Q15390 333 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 OLFML1Q6UWY5 402 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 GDAP1Q8TB36 358 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 DENND1AQ8TEH3 1009 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 ALKBH8Q96BT7 664 aaKnown RBP15.51■□□□□ 0.07
NUP54-217ENST00000514987 PEBP4Q96S96 227 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 PARK7Q99497 189 aaKnown RBP15.51■□□□□ 0.07
NUP54-217ENST00000514987 SLC40A1Q9NP59 571 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 TMEM51Q9NW97 253 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 CNTN3Q9P232 1028 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 RABGEF1Q9UJ41 708 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 SLC12A4Q9UP95 1085 aa15.51■□□□□ 0.07
NUP54-217ENST00000514987 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms