RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 PIN4Q9Y237 131 aaKnown RBP8.58□□□□□ -1.04
CPNE4-211ENST00000514439 EXOC1LA0A1B0GW35 172 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 GOLGA8MH3BSY2 632 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 DPYSL4O14531 572 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 MCF2LO15068 1137 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 HCRTO43612 131 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 PRPSAP2O60256 369 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 GABBR2O75899 941 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ENDOD1O94919 500 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 RPL22P35268 128 aaKnown RBP8.58□□□□□ -1.04
CPNE4-211ENST00000514439 PSEN2P49810 448 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 LIG3P49916 1009 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ADAM17P78536 824 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ZNF200P98182 395 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ATP11AP98196 1134 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 DPYSL3Q14195 570 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 SNX17Q15036 470 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 CCL14Q16627 93 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 CCDC14Q49A88 953 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ANKRD22Q5VYY1 191 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 CENPUQ71F23 418 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 TADA2BQ86TJ2 420 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 UNC45BQ8IWX7 931 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 LRRC34Q8IZ02 419 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 ZBED8Q8IZ13 594 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 OTUD6BQ8N6M0 293 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 OR6B3Q8NGW1 331 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 MGARPQ8TDB4 240 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 SLC35F5Q8WV83 523 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 CPT1BQ92523 772 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 DPEP3Q9H4B8 488 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 HESX1Q9UBX0 185 aa8.58□□□□□ -1.04
CPNE4-211ENST00000514439 UBQLN1Q9UMX0 589 aaKnown RBP8.58□□□□□ -1.04
CPNE4-211ENST00000514439 PCNTO95613 3336 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 A8MXQ7 604 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 HAS3O00219 553 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 IGF2BP3O00425 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 ALOX15BO15296 676 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 PAPSS1O43252 624 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TREHO43280 583 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 BANF1O75531 89 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 RBP3P10745 1247 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 BRAFP15056 766 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 GCAP28676 217 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 AXLP30530 894 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 GAD2Q05329 585 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 PDIA2Q13087 525 aaKnown RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 IRF5Q13568 498 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 LRRC14Q15048 493 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TMED2Q15363 201 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 HIF1AQ16665 826 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 FBXO47Q5MNV8 452 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 PCGF5Q86SE9 256 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TMEM110Q86TL2 294 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SESTD1Q86VW0 696 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SRRM1Q8IYB3 904 aaKnown RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 RIBC1Q8N443 379 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 ANKRD42Q8N9B4 389 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SPATA18Q8TC71 538 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 CABS1Q96KC9 395 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 MAK16Q9BXY0 300 aaKnown RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 VPS37BQ9H9H4 285 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 KCNK9Q9NPC2 374 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 NGRNQ9NPE2 291 aaKnown RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 GPATCH2LQ9NWQ4 482 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SPTLC1O15269 473 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 MYL3P08590 195 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 CCDC130P13994 396 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SDC4P31431 198 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 NRLP54845 237 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 BEX3Q00994 111 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 MPP2Q14168 576 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 KRT81Q14533 505 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 NOMO1Q15155 1222 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 RNF187Q5TA31 235 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-211ENST00000514439 ARHGAP17Q68EM7 881 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SCYL2Q6P3W7 929 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 CCDC13Q8IYE1 715 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 C7orf31Q8N865 590 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 NAT8LQ8N9F0 302 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 FAM172AQ8WUF8 416 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 KBTBD7Q8WVZ9 684 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 DYDC1Q8WWB3 177 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms