RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ATP8B3O60423 1300 aa8.81□□□□□ -1
CCL28-204ENST00000514421 VCANP13611 3396 aa8.81□□□□□ -1
CCL28-204ENST00000514421 SSU72P8A0A1W2PR75 194 aa8.81□□□□□ -1
CCL28-204ENST00000514421 SLC38A8A6NNN8 435 aa8.81□□□□□ -1
CCL28-204ENST00000514421 PI4K2BG5E9Z4 385 aa8.81□□□□□ -1
CCL28-204ENST00000514421 CLDN5O00501 218 aa8.81□□□□□ -1
CCL28-204ENST00000514421 EPHB6O15197 1021 aa8.81□□□□□ -1
CCL28-204ENST00000514421 MOSPD3O75425 235 aa8.81□□□□□ -1
CCL28-204ENST00000514421 HMGA1P17096 107 aaKnown RBP8.81□□□□□ -1
CCL28-204ENST00000514421 ANXA13P27216 316 aa8.81□□□□□ -1
CCL28-204ENST00000514421 GABRR2P28476 465 aa8.81□□□□□ -1
CCL28-204ENST00000514421 CDC25CP30307 473 aa8.81□□□□□ -1
CCL28-204ENST00000514421 CCR2P41597 374 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ARHGAP25P42331 645 aa8.81□□□□□ -1
CCL28-204ENST00000514421 GCNT1Q02742 428 aa8.81□□□□□ -1
CCL28-204ENST00000514421 EXOC3L4Q17RC7 722 aa8.81□□□□□ -1
CCL28-204ENST00000514421 SLC5A9Q2M3M2 681 aa8.81□□□□□ -1
CCL28-204ENST00000514421 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
CCL28-204ENST00000514421 ASTE1Q2TB18 679 aaPredicted RBP8.81□□□□□ -1
CCL28-204ENST00000514421 ZNF394Q53GI3 561 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ARHGAP15Q53QZ3 475 aa8.81□□□□□ -1
CCL28-204ENST00000514421 SDHAF4Q5VUM1 108 aa8.81□□□□□ -1
CCL28-204ENST00000514421 DENND5BQ6ZUT9 1274 aa8.81□□□□□ -1
CCL28-204ENST00000514421 TMC8Q8IU68 726 aa8.81□□□□□ -1
CCL28-204ENST00000514421 NPAS3Q8IXF0 933 aa8.81□□□□□ -1
CCL28-204ENST00000514421 C12orf29Q8N999 325 aa8.81□□□□□ -1
CCL28-204ENST00000514421 GPR152Q8TDT2 470 aa8.81□□□□□ -1
CCL28-204ENST00000514421 FAM81BQ96LP2 452 aa8.81□□□□□ -1
CCL28-204ENST00000514421 MYRFLQ96LU7 910 aa8.81□□□□□ -1
CCL28-204ENST00000514421 TWNKQ96RR1 684 aa8.81□□□□□ -1
CCL28-204ENST00000514421 CHP1Q99653 195 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ZNF518BQ9C0D4 1074 aa8.81□□□□□ -1
CCL28-204ENST00000514421 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
CCL28-204ENST00000514421 GANQ9H2C0 597 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ATXN3LQ9H3M9 355 aa8.81□□□□□ -1
CCL28-204ENST00000514421 KCNK12Q9HB15 430 aa8.81□□□□□ -1
CCL28-204ENST00000514421 ZNF334Q9HCZ1 680 aaPredicted RBP8.81□□□□□ -1
CCL28-204ENST00000514421 EHD2Q9NZN4 543 aa8.81□□□□□ -1
CCL28-204ENST00000514421 AIPL1Q9NZN9 384 aa8.81□□□□□ -1
CCL28-204ENST00000514421 UXTQ9UBK9 157 aaPredicted RBP8.81□□□□□ -1
CCL28-204ENST00000514421 ZMYM5Q9UJ78 669 aa8.81□□□□□ -1
CCL28-204ENST00000514421 MAGED2Q9UNF1 606 aaPredicted RBP8.81□□□□□ -1
CCL28-204ENST00000514421 REXO2Q9Y3B8 237 aaKnown RBP8.81□□□□□ -1
CCL28-204ENST00000514421 UQCRHLA0A096LP55 91 aa8.8□□□□□ -1
CCL28-204ENST00000514421 A0A1W2PRU2 124 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SOBPA7XYQ1 873 aa8.8□□□□□ -1
CCL28-204ENST00000514421 ANHXE9PGG2 379 aa8.8□□□□□ -1
CCL28-204ENST00000514421 F8VP50 259 aa8.8□□□□□ -1
CCL28-204ENST00000514421 DCXO43602 365 aa8.8□□□□□ -1
CCL28-204ENST00000514421 F11P03951 625 aa8.8□□□□□ -1
CCL28-204ENST00000514421 UQCRHP07919 91 aa8.8□□□□□ -1
CCL28-204ENST00000514421 GJA1P17302 382 aa8.8□□□□□ -1
CCL28-204ENST00000514421 CEBPBP17676 345 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SLC9A1P19634 815 aa8.8□□□□□ -1
CCL28-204ENST00000514421 RAD23BP54727 409 aa8.8□□□□□ -1
CCL28-204ENST00000514421 KRT83P78385 493 aa8.8□□□□□ -1
CCL28-204ENST00000514421 ORC1Q13415 861 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TDGQ13569 410 aa8.8□□□□□ -1
CCL28-204ENST00000514421 MTMR3Q13615 1198 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TUBB2AQ13885 445 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TEAD2Q15562 447 aa8.8□□□□□ -1
CCL28-204ENST00000514421 HGSNATQ68CP4 663 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
CCL28-204ENST00000514421 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
CCL28-204ENST00000514421 GAREM2Q75VX8 874 aa8.8□□□□□ -1
CCL28-204ENST00000514421 MTSS1LQ765P7 747 aa8.8□□□□□ -1
CCL28-204ENST00000514421 RRAGAQ7L523 313 aa8.8□□□□□ -1
CCL28-204ENST00000514421 UBALD2Q8IYN6 164 aa8.8□□□□□ -1
CCL28-204ENST00000514421 FUKQ8N0W3 1084 aa8.8□□□□□ -1
CCL28-204ENST00000514421 NUP93Q8N1F7 819 aa8.8□□□□□ -1
CCL28-204ENST00000514421 PPM1KQ8N3J5 372 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SLC44A3Q8N4M1 653 aa8.8□□□□□ -1
CCL28-204ENST00000514421 UBR7Q8N806 425 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SLC4A11Q8NBS3 891 aa8.8□□□□□ -1
CCL28-204ENST00000514421 NEK11Q8NG66 645 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SHKBP1Q8TBC3 707 aa8.8□□□□□ -1
CCL28-204ENST00000514421 SLC2A14Q8TDB8 520 aa8.8□□□□□ -1
CCL28-204ENST00000514421 ING5Q8WYH8 240 aa8.8□□□□□ -1
CCL28-204ENST00000514421 JAKMIP2Q96AA8 810 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
CCL28-204ENST00000514421 SMARCD1Q96GM5 515 aa8.8□□□□□ -1
CCL28-204ENST00000514421 GCNAQ96QF7 691 aa8.8□□□□□ -1
CCL28-204ENST00000514421 ARID3AQ99856 593 aa8.8□□□□□ -1
CCL28-204ENST00000514421 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TUBB2BQ9BVA1 445 aa8.8□□□□□ -1
CCL28-204ENST00000514421 UBXN6Q9BZV1 441 aa8.8□□□□□ -1
CCL28-204ENST00000514421 EPHX3Q9H6B9 360 aa8.8□□□□□ -1
CCL28-204ENST00000514421 HAUS4Q9H6D7 363 aa8.8□□□□□ -1
CCL28-204ENST00000514421 TASP1Q9H6P5 420 aa8.8□□□□□ -1
CCL28-204ENST00000514421 IL21Q9HBE4 155 aa8.8□□□□□ -1
CCL28-204ENST00000514421 UBE2TQ9NPD8 197 aaPredicted RBP8.8□□□□□ -1
CCL28-204ENST00000514421 ZNHIT6Q9NWK9 470 aaKnown RBP8.8□□□□□ -1
CCL28-204ENST00000514421 COMMD8Q9NX08 183 aa8.8□□□□□ -1
CCL28-204ENST00000514421 HMGXB4Q9UGU5 601 aa8.8□□□□□ -1
CCL28-204ENST00000514421 MUTYHQ9UIF7 546 aa8.8□□□□□ -1
CCL28-204ENST00000514421 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
CCL28-204ENST00000514421 PES1O00541 588 aaKnown RBP8.79□□□□□ -1
CCL28-204ENST00000514421 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
CCL28-204ENST00000514421 AP1G2O75843 785 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms