RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PSRC1Q6PGN9 363 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-205ENST00000514271 H2AFVQ71UI9 128 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SERINC5Q86VE9 423 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 KREMEN1Q96MU8 473 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 RUFY1Q96T51 708 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 PLIN2Q99541 437 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SPATA16Q9BXB7 569 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 NFKBIZQ9BYH8 718 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SENP6Q9GZR1 1112 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-205ENST00000514271 DCLRE1BQ9H816 532 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 SPATS2LQ9NUQ6 558 aaKnown RBP7.77□□□□□ -1.16
CLIP1-205ENST00000514271 TBX21Q9UL17 535 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 C2CD2Q9Y426 696 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 CLUHO75153 1309 aa7.77□□□□□ -1.16
CLIP1-205ENST00000514271 E9PMD0 336 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 H3BNX3 289 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CEP104O60308 925 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 SLITRK3O94933 977 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CCNE2O96020 404 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 NR3C1P04150 777 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 ALCAMQ13740 583 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 TFDP1Q14186 410 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 IER5Q5VY09 327 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 C16orf87Q6PH81 154 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 UGT2A3Q6UWM9 527 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 BANPQ8N9N5 519 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 UBLCP1Q8WVY7 318 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CDK5RAP3Q96JB5 506 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 POP1Q99575 1024 aaKnown RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 EIF2AK1Q9BQI3 630 aaKnown RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 RUSC1Q9BVN2 902 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CCDC106Q9BWC9 280 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 AVENQ9NQS1 362 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 ZNHIT2Q9UHR6 403 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 NAALADL1Q9UQQ1 740 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 NOD1Q9Y239 953 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CNTNAP2Q9UHC6 1331 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 TMEM221A6NGB7 291 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF195O14628 629 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 GSC2O15499 205 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 SNNO75324 88 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 TIMP1P01033 207 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 PRKCGP05129 697 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 FGFR4P22455 802 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 CAV1Q03135 178 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 SNX1Q13596 522 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 MXD4Q14582 209 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 TARBP2Q15633 366 aaKnown RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 GRIK4Q16099 956 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 DSTYKQ6XUX3 929 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 OTOAQ7RTW8 1153 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 LRRC43Q8N309 656 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 WDR60Q8WVS4 1066 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 PRR11Q96HE9 360 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-205ENST00000514271 FTHL17Q9BXU8 183 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 C2orf40Q9H1Z8 148 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 GPAMQ9HCL2 828 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 RGL1Q9NZL6 768 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
CLIP1-205ENST00000514271 IGKV6-21A0A0C4DH24 114 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MAFO75444 373 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-205ENST00000514271 SKIP12755 728 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MAN1A1P33908 653 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MAGEA8P43361 318 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 RNASELQ05823 741 aaKnown RBP7.76□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF252P-AS1Q0IIN9 211 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MAPK6Q16659 721 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 EXOC3L4Q17RC7 722 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 CCDC137Q6PK04 289 aaKnown RBP7.76□□□□□ -1.17
CLIP1-205ENST00000514271 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF720Q7Z2F6 126 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 PEX26Q7Z412 305 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 SLC20A1Q8WUM9 679 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 DCAKDQ8WVC6 231 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 COPS5Q92905 334 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 AGPAT1Q99943 283 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 LBHD1Q9BQE6 289 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MCMBPQ9BTE3 642 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 IKZF4Q9H2S9 585 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 PNPLA8Q9NP80 782 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF212Q9UDV6 495 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 AMFRQ9UKV5 643 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 DNM3Q9UQ16 869 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 MYADML2A6NDP7 307 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 RASGRF2O14827 1237 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 HIP1RO75146 1068 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 SUN1O94901 812 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 SELPP16109 830 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 AXLP30530 894 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 GTF2H1P32780 548 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 PRKCEQ02156 737 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 CENPCQ03188 943 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 SLC1A5Q15758 541 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 CNPY1Q3B7I2 92 aa7.76□□□□□ -1.17
CLIP1-205ENST00000514271 FAM133BQ5BKY9 247 aaKnown RBP7.76□□□□□ -1.17
CLIP1-205ENST00000514271 RABGAP1LQ5R372 815 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms