RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 UPP1Q16831 310 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 XKR4Q5GH76 650 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 GLRA4Q5JXX5 417 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 HYIQ5T013 277 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CDKAL1Q5VV42 579 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 PDXDC1Q6P996 788 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CD300LGQ6UXG3 332 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 ALKAL1Q6UXT8 129 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 SYT2Q8N9I0 419 aaPredicted RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 STAMQ92783 540 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 MYADMQ96S97 322 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 PLIN2Q99541 437 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 NTPCRQ9BSD7 190 aaKnown RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 TCHPQ9BT92 498 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 TIPINQ9BVW5 301 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CCDC94Q9BW85 323 aaPredicted RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 MRPL4Q9BYD3 311 aaKnown RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 CDT1Q9H211 546 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 C17orf75Q9HAS0 396 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 IGSF9Q9P2J2 1179 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 ARHGAP28Q9P2N2 729 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 EPS15L1Q9UBC2 864 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 KCNG1Q9UIX4 513 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CTNND2Q9UQB3 1225 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 SMC3Q9UQE7 1217 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CLUHO75153 1309 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 PHLPP2Q6ZVD8 1323 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CACNA1HO95180 2353 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 NPHP3-ACAD11A0A0J9YXS1 232 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 TMEM189-UBE2V1I3L0A0 370 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 TRAPPC3O43617 180 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 PLA2G4BP0C869 781 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 MCF2P10911 925 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 PLS3P13797 630 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 KCNE1P15382 129 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 PROZP22891 400 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 OR1D2P34982 312 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 CLCN5P51795 746 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 SLC12A3P55017 1021 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 RAB33AQ14088 237 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ZNF568Q3ZCX4 644 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ARSHQ5FYA8 562 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 LARP1BQ659C4 914 aaKnown RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 ARL6IP4Q66PJ3 421 aaKnown RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 SLC44A3Q8N4M1 653 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 TMEM105Q8N8V8 129 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 TMEM161BQ8NDZ6 487 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 CDK5RAP3Q96JB5 506 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ZBTB45Q96K62 511 aaPredicted RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 RHOVQ96L33 236 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 UROC1Q96N76 676 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ZMAT2Q96NC0 199 aaKnown RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 MFSD1Q9H3U5 465 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 TOPORSQ9NS56 1045 aaPredicted RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
RFC1-215ENST00000512881 FBXW11Q9UKB1 542 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ADAM30Q9UKF2 790 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 DUSP12Q9UNI6 340 aa7.5□□□□□ -1.21
RFC1-215ENST00000512881 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.5□□□□□ -1.21
RFC1-215ENST00000512881 ZNF318Q5VUA4 2279 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 I3L4J1 428 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 PODXLO00592 558 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 ABLIM1O14639 778 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 SLC26A4O43511 780 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 NARSO43776 548 aaKnown RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 TOM1L1O75674 476 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 HNRNPA1P09651 372 aaKnown RBP eCLIP7.49□□□□□ -1.21
RFC1-215ENST00000512881 HARSP12081 509 aaKnown RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 LAMP2P13473 410 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 TKTP29401 623 aaKnown RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 UBA7P41226 1012 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 BRCC3P46736 316 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 NTHL1P78549 312 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 TNK2Q07912 1038 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 STRN3Q13033 797 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 TMEM119Q4V9L6 283 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 PPM1LQ5SGD2 360 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 AXDND1Q5T1B0 1012 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 LIN9Q5TKA1 542 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 SLC6A19Q695T7 634 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 MPZL3Q6UWV2 235 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 RSPO2Q6UXX9 243 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 GRASPQ7Z6J2 395 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 THAP5Q7Z6K1 395 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 DNAJB8Q8NHS0 232 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 ATOH1Q92858 354 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 C18orf25Q96B23 403 aaPredicted RBP7.49□□□□□ -1.21
RFC1-215ENST00000512881 COX4I2Q96KJ9 171 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 SNX27Q96L92 541 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 AK8Q96MA6 479 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 IRF2BPLQ9H1B7 796 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 SLC38A7Q9NVC3 462 aa7.49□□□□□ -1.21
RFC1-215ENST00000512881 C19orf73Q9NVV2 129 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms