RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 PPP4R3AQ6IN85 833 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 GATAD2AQ86YP4 633 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 ADGRG2Q8IZP9 1017 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 CEP120Q8N960 986 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 GABRG3Q99928 467 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 CCDC94Q9BW85 323 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 SLC25A18Q9H1K4 315 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 PCED1AQ9H1Q7 454 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 ZSWIM4Q9H7M6 989 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 TMPRSS4Q9NRS4 437 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 GCNT4Q9P109 453 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 UXTQ9UBK9 157 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
CLCN3-208ENST00000512813 STARD13Q9Y3M8 1113 aa10.14□□□□□ -0.79
CLCN3-208ENST00000512813 CITO14578 2027 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 TBC1D3BA6NDS4 549 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 ADH1CP00326 375 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 CSH1P0DML2 217 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 CSH2P0DML3 217 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 ADH5P11766 374 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 TYMPP19971 482 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 CASRP41180 1078 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 SLC39A12Q504Y0 691 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 KCNT1Q5JUK3 1230 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 C10orf76Q5T2E6 689 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 EGFLAMQ63HQ2 1017 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 FILIP1Q7Z7B0 1213 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 TERB1Q8NA31 727 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 OR10T2Q8NGX3 314 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 ZNF564Q8TBZ8 553 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-208ENST00000512813 BICD2Q8TD16 824 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
CLCN3-208ENST00000512813 POM121Q96HA1 1249 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 CCNL2Q96S94 520 aaPredicted RBP10.13□□□□□ -0.79
CLCN3-208ENST00000512813 TM9SF3Q9HD45 589 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 ITM2CQ9NQX7 267 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 FOXD4L1Q9NU39 408 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 RGL1Q9NZL6 768 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 ANAPC1Q9H1A4 1944 aa10.13□□□□□ -0.79
CLCN3-208ENST00000512813 APCP25054 2843 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 IGLV3-19P01714 112 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 NFICP08651 508 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 OXTRP30559 389 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 MCM5P33992 734 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ATP2C1P98194 919 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ST3GAL1Q11201 340 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 CLN3Q13286 438 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ORC1Q13415 861 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 KCNB1Q14721 858 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 NCAPHQ15003 741 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 EPHA7Q15375 998 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 SKIDA1Q1XH10 827 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ANKRD45Q5TZF3 282 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ATF7IP2Q5U623 682 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 RHBDF2Q6PJF5 856 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 LAYNQ6UX15 382 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
CLCN3-208ENST00000512813 KANSL1Q7Z3B3 1105 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ETFBKMTQ8IXQ9 262 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 CHPFQ8IZ52 775 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ARL14EPQ8N8R7 260 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-208ENST00000512813 SPPL2BQ8TCT7 592 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ERLEC1Q96DZ1 483 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 SGF29Q96ES7 293 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 TRMT2BQ96GJ1 504 aaKnown RBP10.12□□□□□ -0.79
CLCN3-208ENST00000512813 FAM20AQ96MK3 541 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 ACOX2Q99424 681 aa10.12□□□□□ -0.79
CLCN3-208ENST00000512813 MAGED2Q9UNF1 606 aaPredicted RBP10.12□□□□□ -0.79
CLCN3-208ENST00000512813 MYOFQ9NZM1 2061 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 MED13Q9UHV7 2174 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 LEFTY2O00292 366 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 SLC9A3R1O14745 358 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-208ENST00000512813 EFSO43281 561 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 TRAK2O60296 914 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 USP12O75317 370 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ITGAVP06756 1048 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 CKMT2P17540 419 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ACP1P24666 158 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 DCTP40126 519 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 TPMTP51580 245 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 FOSBP53539 338 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ZXDBP98169 803 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 E2F1Q01094 437 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 GRIN1Q05586 938 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 SMARCB1Q12824 385 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
CLCN3-208ENST00000512813 RTN1Q16799 776 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ZSCAN23Q3MJ62 389 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 APOA5Q6Q788 366 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 MOXD1Q6UVY6 613 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 NUDT18Q6ZVK8 323 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 EID2Q8N6I1 236 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 TBCKQ8TEA7 893 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms