RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 DDIT4Q9NX09 232 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ARHGAP28Q9P2N2 729 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 HCRTO43612 131 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RPS6KA5O75582 802 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 SERPINB6P35237 376 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ARFIP2P53365 341 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 AUHQ13825 339 aaKnown RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CELF3Q5SZQ8 465 aaKnown RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 GLIS1Q8NBF1 620 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RMDN2Q96LZ7 410 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 TMEM237Q96Q45 408 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ATXN3LQ9H3M9 355 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PRDM16Q9HAZ2 1276 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ZFATQ9P243 1243 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 HAO1Q9UJM8 370 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CLDN5O00501 218 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CRCPO75575 148 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RGS20O76081 388 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RECQL4O94761 1208 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 HMGCRP04035 888 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 GSTA1P08263 222 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 GSTA2P09210 222 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CCNG2Q16589 344 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 EFHC2Q5JST6 749 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 METTL23Q86XA0 190 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 MFSD14AQ96MC6 490 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 FIZ1Q96SL8 496 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PAFAH2Q99487 392 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PSMC3IPQ9P2W1 217 aaPredicted RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 NCANO14594 1321 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 GYG2O15488 501 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PGK1P00558 417 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CYP1A2P05177 515 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ENO1P06733 434 aaKnown RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 PAX7P23759 505 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RBL1P28749 1068 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 CDC25CP30307 473 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ZCCHC23Q6ZST2 131 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 RUBCNQ92622 972 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 USP6NLQ92738 828 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 N4BP2L2Q92802 583 aaPredicted RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 LPPQ93052 612 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ACTR5Q9H9F9 607 aaPredicted RBP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRDM16-207ENST00000512462 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
PRDM16-207ENST00000512462 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TPH1P17752 444 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TPI1P60174 286 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 ADIGQ0VDE8 80 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 MAP7D1Q3KQU3 841 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 ARID3BQ8IVW6 561 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 OR6P1Q8NGX9 317 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TTC25Q96NG3 672 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TTC1Q99614 292 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 SPON2Q9BUD6 331 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 CPSF2Q9P2I0 782 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 KRT38O76015 456 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 C4BPAP04003 597 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TGFB3P10600 412 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 EPHB2P29323 1055 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 ATXN1P54253 815 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 KLHL38Q2WGJ6 581 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 NSMCE1Q8WV22 266 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.425e-8■■■■■ 65.3
PRDM16-207ENST00000512462 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 FAM129AQ9BZQ8 928 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 ACSS2Q9NR19 701 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 TLK1Q9UKI8 766 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 L3MBTL1Q9Y468 752 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 MYH7BA7E2Y1 1941 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 MROH7Q68CQ1 1323 aa12.43□□□□□ -0.42
PRDM16-207ENST00000512462 KIAA0100Q14667 2235 aaKnown RBP12.43□□□□□ -0.42
PRDM16-207ENST00000512462 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 MAFO75444 373 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 VNN1O95497 513 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ASS1P00966 412 aaKnown RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PYGBP11216 843 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ADRA1DP25100 572 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 THPOP40225 353 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 CENPCQ03188 943 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms