RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RNF180Q86T96 592 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 ZDHHC14Q8IZN3 488 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 TNIP3Q96KP6 325 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 MRPL45Q9BRJ2 306 aaKnown RBP13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 FRMD8P1Q9BZ68 369 aaPredicted RBP13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 FAM105AQ9NUU6 356 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 TSPAN16Q9UKR8 245 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 PCDHA11Q9Y5I1 949 aa13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 TPRP12270 2363 aaKnown RBP13.79□□□□□ -0.2
DEPDC1B-206ENST00000512452 CHD7Q9P2D1 2997 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 MOXD2PA6NHM9 499 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PROB1E7EW31 1015 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 H3BQF6 201 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 DPYSL4O14531 572 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PPEF2O14830 753 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 DAPK3O43293 454 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 HUS1O60921 280 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 TJP3O95049 919 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 GAS8O95995 478 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 CHRNA1P02708 482 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 ERBB2P04626 1255 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 DESP17661 470 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PSMA2P25787 234 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 RPL9P32969 192 aaKnown RBP13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PCK1P35558 622 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 OGDHQ02218 1023 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 SOWAHAQ2M3V2 549 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 GOLGA7BQ2TAP0 167 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 GLRA4Q5JXX5 417 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 ARCQ7LC44 396 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 BMP8AQ7Z5Y6 402 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 ADAT2Q7Z6V5 191 aaKnown RBP13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 TMEM110Q86TL2 294 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 CCDC105Q8IYK2 499 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 RUFY1Q96T51 708 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 SH3GL2Q99962 352 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 CERS4Q9HA82 394 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
DEPDC1B-206ENST00000512452 A8MXQ7 604 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 GOLGA8KD6RF30 607 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 F8VP50 259 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTGESO14684 152 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 NDC80O14777 642 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 RNF8O76064 485 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 KRT1P04264 644 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 PFKMP08237 780 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 RFC1P35251 1148 aaPredicted RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 GNL1P36915 607 aaPredicted RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 SSR1P43307 286 aaKnown RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ACADSBP45954 432 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 BCAT1P54687 386 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 CAV1Q03135 178 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TAZQ16635 292 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTGISQ16647 500 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZFHX4Q86UP3 3567 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ANKRD52Q8NB46 1076 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 ATL2Q8NHH9 583 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC35F5Q8WV83 523 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 HSFY1Q96LI6 401 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLITRK1Q96PX8 696 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRIM51Q9BSJ1 452 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 CNPY3Q9BT09 278 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 TSPYL1Q9H0U9 437 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 CXCL16Q9H2A7 254 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 METTL5Q9NRN9 209 aaKnown RBP13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 WHRNQ9P202 907 aa13.77□□□□□ -0.21
DEPDC1B-206ENST00000512452 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms