RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ZNF507Q8TCN5 953 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 LEO1Q8WVC0 666 aaPredicted RBP9.25□□□□□ -0.93
PDPN-209ENST00000510906 SCFD1Q8WVM8 642 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 RNF34Q969K3 372 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 ZNF512Q96ME7 567 aaPredicted RBP9.25□□□□□ -0.93
PDPN-209ENST00000510906 ZNF560Q96MR9 790 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 PLA2G2FQ9BZM2 168 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 MTMR12Q9C0I1 747 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 ZCWPW1Q9H0M4 648 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 TBC1D17Q9HA65 648 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 MAGEF1Q9HAY2 307 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 ASAH2Q9NR71 780 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 ARHGEF3Q9NR81 526 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 SLC2A4RGQ9NR83 387 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 LATS2Q9NRM7 1088 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 AGPAT3Q9NRZ7 376 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 GDE1Q9NZC3 331 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 HSPBP1Q9NZL4 362 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
PDPN-209ENST00000510906 KMT2EQ8IZD2 1858 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 A0A1B0GVL5 298 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 ZNF233A6NK53 670 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 H0Y858 1186 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 ZNF197O14709 1029 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 KIAA0391O15091 583 aaKnown RBP9.24□□□□□ -0.93
PDPN-209ENST00000510906 CLIC2O15247 247 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 KRT19P08727 400 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 USP17L7P0C7H9 530 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 TMEM191BP0C7N4 346 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 PFKFB1P16118 471 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 FCARP24071 287 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 PNPLA4P41247 253 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 EPHA5P54756 1037 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 BFSP1Q12934 665 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 TEAD2Q15562 447 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 FAM78AQ5JUQ0 283 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 TANGO2Q6ICL3 276 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 TMC8Q8IU68 726 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 CEP57L1Q8IYX8 460 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 THEM5Q8N1Q8 247 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 PDCL2Q8N4E4 241 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 SHKBP1Q8TBC3 707 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
PDPN-209ENST00000510906 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
PDPN-209ENST00000510906 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 ZSWIM3Q96MP5 696 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 SEPT5Q99719 369 aaPredicted RBP9.24□□□□□ -0.93
PDPN-209ENST00000510906 LRRC3Q9BY71 257 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 ZNF334Q9HCZ1 680 aaPredicted RBP9.24□□□□□ -0.93
PDPN-209ENST00000510906 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 INTS13Q9NVM9 706 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 ITGA11Q9UKX5 1188 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 DSEQ9UL01 958 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 L1RE1Q9UN81 338 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 NOTCH4Q99466 2003 aa9.24□□□□□ -0.93
PDPN-209ENST00000510906 MYH15Q9Y2K3 1946 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 PVALEFA0A1B0GWK0 134 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 HCRTO43612 131 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 KLRC4O43908 158 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 GADD45BO75293 160 aaPredicted RBP9.23□□□□□ -0.93
PDPN-209ENST00000510906 ECI2O75521 394 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 ATF6P18850 670 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 CMA1P23946 247 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 ACAT1P24752 427 aaKnown RBP9.23□□□□□ -0.93
PDPN-209ENST00000510906 ALDH1A3P47895 512 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 CYP2J2P51589 502 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 EPHB3P54753 998 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 KRT85P78386 507 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 RBP5P82980 135 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 PLAURQ03405 335 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 PLD1Q13393 1074 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
PDPN-209ENST00000510906 BMT2Q1RMZ1 405 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 MGAT5BQ3V5L5 792 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 STXBP5Q5T5C0 1151 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 DNAJB7Q7Z6W7 309 aaPredicted RBP9.23□□□□□ -0.93
PDPN-209ENST00000510906 OSTM1Q86WC4 334 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 LRRC52Q8N7C0 313 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 LEMD2Q8NC56 503 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 ATOH1Q92858 354 aaPredicted RBP9.23□□□□□ -0.93
PDPN-209ENST00000510906 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 LPIN3Q9BQK8 851 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 KIAA1586Q9HCI6 787 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 TMLHEQ9NVH6 421 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 SNX9Q9Y5X1 595 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 NCANO14594 1321 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 UBE4BO95155 1302 aa9.23□□□□□ -0.93
PDPN-209ENST00000510906 HUS1O60921 280 aa9.22□□□□□ -0.93
PDPN-209ENST00000510906 LRRN2O75325 713 aa9.22□□□□□ -0.93
PDPN-209ENST00000510906 TNNC2P02585 160 aa9.22□□□□□ -0.93
PDPN-209ENST00000510906 DCNP07585 359 aaKnown RBP9.22□□□□□ -0.93
PDPN-209ENST00000510906 DLATP10515 647 aaKnown RBP9.22□□□□□ -0.93
PDPN-209ENST00000510906 VIPR2P41587 438 aa9.22□□□□□ -0.93
PDPN-209ENST00000510906 NRLP54845 237 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms