RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SYT12Q8IV01 421 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 KBTBD7Q8WVZ9 684 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 PNKPQ96T60 521 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 CBWD1Q9BRT8 395 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 POLMQ9NP87 494 aaPredicted RBP17.09■□□□□ 0.33
CXCL1-202ENST00000509101 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 KLK13Q9UKR3 277 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 CDH9Q9ULB4 789 aa17.09■□□□□ 0.33
CXCL1-202ENST00000509101 FASNP49327 2511 aaKnown RBP17.09■□□□□ 0.33
CXCL1-202ENST00000509101 PTPRJQ12913 1337 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 TCRBV21S2A2A0A5A6 115 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 ABL1P00519 1130 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 GAP43P17677 238 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 PFKLP17858 780 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 GARTP22102 1010 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 SLC7A9P82251 487 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
CXCL1-202ENST00000509101 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 LYSMD4Q5XG99 296 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 ANKRD36BP1Q96IX9 119 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 RNF38Q9H0F5 515 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 FSCN3Q9NQT6 498 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 ARHGEF4Q9NR80 690 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 STK17AQ9UEE5 414 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
CXCL1-202ENST00000509101 NEUROG3Q9Y4Z2 214 aa17.08■□□□□ 0.32
CXCL1-202ENST00000509101 ZNF840PA6NDX5 716 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 SLC9A3R1O14745 358 aaPredicted RBP17.07■□□□□ 0.32
CXCL1-202ENST00000509101 CFIP05156 583 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 ADH5P11766 374 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 EIF2DP41214 584 aaKnown RBP17.07■□□□□ 0.32
CXCL1-202ENST00000509101 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
CXCL1-202ENST00000509101 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 MAP7D1Q3KQU3 841 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 EOGTQ5NDL2 527 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 ADGRG2Q8IZP9 1017 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 DNAJC19Q96DA6 116 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 TTLL2Q9BWV7 592 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 CFAP97Q9P2B7 532 aa17.07■□□□□ 0.32
CXCL1-202ENST00000509101 F8VP50 259 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 TRIM66O15016 1216 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 ADAM23O75077 832 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 OLFM2O95897 454 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 ADH1CP00326 375 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 ITPKAP23677 461 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 KIR2DL1P43626 348 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-202ENST00000509101 IFRD2Q12894 506 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-202ENST00000509101 MAPRE1Q15691 268 aaKnown RBP17.06■□□□□ 0.32
CXCL1-202ENST00000509101 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
CXCL1-202ENST00000509101 MDH1BQ5I0G3 518 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 LIMS2Q7Z4I7 341 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 GPD1LQ8N335 351 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 PCED1BQ96HM7 432 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 CEP295NLQ96MC4 621 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 GTPBP2Q9BX10 602 aaKnown RBP17.06■□□□□ 0.32
CXCL1-202ENST00000509101 INTS13Q9NVM9 706 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 EHD2Q9NZN4 543 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 PILRBQ9UKJ0 227 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 LHX6Q9UPM6 363 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 MSRB2Q9Y3D2 182 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 PCDHB13Q9Y5F0 798 aa17.06■□□□□ 0.32
CXCL1-202ENST00000509101 FREM2Q5SZK8 3169 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 OAS1P00973 400 aaKnown RBP17.05■□□□□ 0.32
CXCL1-202ENST00000509101 TNNC2P02585 160 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 MBL2P11226 248 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-202ENST00000509101 IDEP14735 1019 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
CXCL1-202ENST00000509101 GRIA2P42262 883 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 ATXN3P54252 364 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-202ENST00000509101 RING1Q06587 406 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 TAF10Q12962 218 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 SEMA3BQ13214 749 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 ACAP1Q15027 740 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 RABEP1Q15276 862 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
CXCL1-202ENST00000509101 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 PIP4P1Q86T03 277 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 HDDC3Q8N4P3 179 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 MYCBPAPQ8TBZ2 947 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 MYH10P35580 1976 aa17.05■□□□□ 0.32
CXCL1-202ENST00000509101 LAMA5O15230 3695 aa17.04■□□□□ 0.32
CXCL1-202ENST00000509101 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms