RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CAPN10Q9HC96 672 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 L1RE1Q9UN81 338 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 KNTC1P50748 2209 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 PIEZO2Q9H5I5 2752 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 LEFTY2O00292 366 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 SLC9A3R1O14745 358 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 GABRDO14764 452 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 AP5Z1O43299 807 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 OPHN1O60890 802 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 APODP05090 189 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 CFIP05156 583 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 ITPKAP23677 461 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 ACAT1P24752 427 aaKnown RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 PCSK1P29120 753 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 TIE1P35590 1138 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 TNFRSF4P43489 277 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 LHX1P48742 406 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 SLC7A9P82251 487 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 GFPT1Q06210 699 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 DHCR24Q15392 516 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 SLC36A4Q6YBV0 504 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 SPATA17Q96L03 361 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 BCCIPQ9P287 314 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 COL6A6A6NMZ7 2263 aa10.06□□□□□ -0.8
NEDD9-211ENST00000508546 TEP1Q99973 2627 aaKnown RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 ATXN2Q99700 1313 aaKnown RBP10.06□□□□□ -0.8
NEDD9-211ENST00000508546 VWA3AA6NCI4 1184 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 TISP43B9A030 160 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 PYCARD-AS1I3L0S3 204 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 ADAM23O75077 832 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 KAT7O95251 611 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 OLFM2O95897 454 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 CD59P13987 128 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
NEDD9-211ENST00000508546 GRIA2P42262 883 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 SLC6A11P48066 632 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 PPP3CCP48454 512 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 MESP2Q0VG99 397 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 SLC14A1Q13336 389 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 POSTNQ15063 836 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 RILPL1Q5EBL4 403 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 VSTM1Q6UX27 236 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 C4orf50Q6ZRC1 276 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 OSTM1Q86WC4 334 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 SFTPA1Q8IWL2 248 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 MINDY1Q8N5J2 469 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 CXorf38Q8TB03 319 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 AK8Q96MA6 479 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 GTPBP2Q9BX10 602 aaKnown RBP10.05□□□□□ -0.8
NEDD9-211ENST00000508546 BLOC1S4Q9NUP1 217 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
NEDD9-211ENST00000508546 AGAP1Q9UPQ3 857 aa10.05□□□□□ -0.8
NEDD9-211ENST00000508546 COL5A1P20908 1838 aaPredicted RBP10.05□□□□□ -0.8
NEDD9-211ENST00000508546 A0A087WV48 116 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 TCRBV21S2A2A0A5A6 115 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 GJB3O75712 270 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ADH1CP00326 375 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ITGB3P05106 788 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 SYPP08247 313 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ADSSP30520 456 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 RPL6Q02878 288 aaKnown RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ZNF33AQ06730 810 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 SRSF1Q07955 248 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 RESTQ13127 1097 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 TRIP6Q15654 476 aaKnown RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 CCDC142Q17RM4 750 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 EMC10Q5UCC4 262 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 RHBDF2Q6PJF5 856 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 C12orf40Q86WS4 652 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 BRSK2Q8IWQ3 736 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ADGRF2Q8IZF7 708 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 POMGNT1Q8WZA1 660 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms