RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SSH2Q76I76 1423 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 CROCC2H7BZ55 1655 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 NWD2Q9ULI1 1742 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 PCNTO95613 3336 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 EIF3CLB5ME19 914 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 YY2O15391 372 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 HAUS5O94927 633 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 ZRANB2O95218 330 aaKnown RBP eCLIP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CASTP20810 708 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 MCM3P25205 808 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 NF2P35240 595 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 MNAT1P51948 309 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 KRTAP10-11P60412 298 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CTXN1P60606 82 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 DDR1Q08345 913 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 OS9Q13438 667 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 IL16Q14005 1332 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 BRD3Q15059 726 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 TXNRD1Q16881 649 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 KIF24Q5T7B8 1368 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 PAPD7Q5XG87 772 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 SDE2Q6IQ49 451 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 VWA1Q6PCB0 445 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 SARM1Q6SZW1 724 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC186Q7Z3E2 898 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CASZ1Q86V15 1759 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 SRRM1Q8IYB3 904 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 TEX11Q8IYF3 940 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC150Q8NCX0 1101 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 NLGN4YQ8NFZ3 816 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 RUNDC1Q96C34 613 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 UROC1Q96N76 676 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 EIF3CQ99613 913 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 UBXN6Q9BZV1 441 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 VEZTQ9HBM0 779 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 BATF3Q9NR55 127 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 GNL3LQ9NVN8 582 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 VSX1Q9NZR4 365 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CPSF2Q9P2I0 782 aaKnown RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 ARPP21Q9UBL0 812 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 ZNF215Q9UL58 517 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 MYO6Q9UM54 1294 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 CDYLQ9Y232 598 aa5.1□□□□□ -1.59
PDLIM5-211ENST00000508531 TTC41PQ6P2S7 1318 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 A0A1W2PS29 197 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC151A5D8V7 595 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 GOLGA6L19H0YKK7 550 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 GRM6O15303 877 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 PROP1O75360 226 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ERLIN2O94905 339 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 AGFG2O95081 481 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 SBK3P0C264 359 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 NBPF7P0C2Y1 421 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 GCFC2P16383 781 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 OAS2P29728 719 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 PRPHP41219 470 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 MAPK10P53779 464 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 RWDD2BP57060 319 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 PROK1P58294 105 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 TARDBPQ13148 414 aaKnown RBP eCLIP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 CUL4AQ13619 759 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 SMC1AQ14683 1233 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ELF2Q15723 593 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ALDH1L2Q3SY69 923 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ZSCAN25Q6NSZ9 544 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 GIMAP6Q6P9H5 292 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ATF7IPQ6VMQ6 1270 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 KRT26Q7Z3Y9 468 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 PEG10Q86TG7 708 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 RSPH3Q86UC2 560 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 APLFQ8IW19 511 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 AMOTL1Q8IY63 956 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 CEP112Q8N8E3 955 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 CTCFLQ8NI51 663 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 BICD2Q8TD16 824 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 TFAP2BQ92481 460 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 FBXL20Q96IG2 436 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 TMX3Q96JJ7 454 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 CFAP53Q96M91 514 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 FAM126AQ9BYI3 521 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 TRIM6Q9C030 488 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ZNF277Q9NRM2 450 aaPredicted RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 HOMER3Q9NSC5 361 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 DDX19AQ9NUU7 478 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ZNF446Q9NWS9 450 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 ANAPC4Q9UJX5 808 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 PYCARDQ9ULZ3 195 aa5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 TMA7Q9Y2S6 64 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-211ENST00000508531 THSD7AQ9UPZ6 1657 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 RTL1A6NKG5 1358 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ARHGEF10O15013 1369 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PRAMEF33A0A0G2JMD5 474 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC189A1A4V9 331 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 APAF1O14727 1248 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CHUKO15111 745 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 POLR3GO15318 223 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ZSCAN12O43309 604 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PRAMEF10O60809 474 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 HSPA1AP0DMV8 641 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 HSPA1BP0DMV9 641 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms