RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 RPP25Q9BUL9 199 aaKnown RBP8.41□□□□□ -1.06
SH3D19-208ENST00000508492 STRA6Q9BX79 667 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 PLEKHA4Q9H4M7 779 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 MRPL44Q9H9J2 332 aaKnown RBP8.41□□□□□ -1.06
SH3D19-208ENST00000508492 RPF1Q9H9Y2 349 aaKnown RBP8.41□□□□□ -1.06
SH3D19-208ENST00000508492 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 SLC38A7Q9NVC3 462 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 FBXL5Q9UKA1 691 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 SORCS3Q9UPU3 1222 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 ZDHHC9Q9Y397 364 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 NUB1Q9Y5A7 615 aa8.41□□□□□ -1.06
SH3D19-208ENST00000508492 CACNA1IQ9P0X4 2223 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 FRMD3A2A2Y4 597 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GOLGA8IPA6NC78 632 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GOLGA8JA6NMD2 632 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 TM4SF5O14894 197 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 TBC1D4O60343 1298 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 PRPF6O94906 941 aaKnown RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ATE1O95260 518 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ADRB2P07550 413 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 LRPAP1P30533 357 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 HOXD13P35453 343 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 PLA2G5P39877 138 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 NLRP12P59046 1061 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ELAVL2Q12926 359 aaKnown RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 SLC5A9Q2M3M2 681 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 LIN9Q5TKA1 542 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ADALQ6DHV7 355 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 CCDC81Q6ZN84 652 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GK5Q6ZS86 529 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ANKS3Q6ZW76 656 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 HDXQ7Z353 690 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GPR65Q8IYL9 337 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 GALNT11Q8NCW6 608 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 HDAC7Q8WUI4 952 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 PGLYRP2Q96PD5 576 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 CBWD1Q9BRT8 395 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 TRIM55Q9BYV6 548 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 BLZF1Q9H2G9 400 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 KCNK12Q9HB15 430 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 PANK4Q9NVE7 773 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 ZDHHC7Q9NXF8 308 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 DNMT3BQ9UBC3 853 aaKnown RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 AGO2Q9UKV8 859 aaKnown RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 R3HCC1Q9Y3T6 440 aaKnown RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.06
SH3D19-208ENST00000508492 MORC2Q9Y6X9 1032 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-208ENST00000508492 NCANO14594 1321 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PTPRJQ12913 1337 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 H0YCG3 227 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 SYN3O14994 580 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PPP6R2O75170 966 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 SOAT2O75908 522 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ABLIM3O94929 683 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 YEATS4O95619 227 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ECEL1O95672 775 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 RPL9P32969 192 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 GMPRP36959 345 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ETFBP38117 255 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CCR2P41597 374 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 GIPRP48546 466 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 AARSP49588 968 aaKnown RBP eCLIP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CREMQ03060 361 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 HTR4Q13639 388 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CTXN3Q4LDR2 81 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 WIPI1Q5MNZ9 446 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 L1TD1Q5T7N2 865 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 SPATA1Q5VX52 437 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 C9orf57Q5W0N0 161 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 FBXW10Q5XX13 1052 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 LMBRD2Q68DH5 695 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CWF19L1Q69YN2 538 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 SLC8B1Q6J4K2 584 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PARM1Q6UWI2 310 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 OTOP3Q7RTS5 596 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 BMP8AQ7Z5Y6 402 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 TMEM105Q8N8V8 129 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 RBBP8NLQ8NC74 664 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 NOC3LQ8WTT2 800 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 POMGNT1Q8WZA1 660 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 FGF14Q92915 247 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 TCEAL4Q96EI5 215 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ZNF396Q96N95 335 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 FAM213AQ9BRX8 229 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 ST6GALNAC4Q9H4F1 302 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PCIF1Q9H4Z3 704 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 CYP4F11Q9HBI6 524 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 FAM86C1Q9NVL1 165 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 UBQLN1Q9UMX0 589 aaKnown RBP8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PCDHA7Q9UN72 937 aa8.39□□□□□ -1.07
SH3D19-208ENST00000508492 PCDHB14Q9Y5E9 798 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms