RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 OLFM2O95897 454 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 KPNA1P52294 538 aaPredicted RBP21.05■□□□□ 0.96
SFXN1-209ENST00000508290 SLC5A3P53794 718 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 STX17P56962 302 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 SLC8A3P57103 927 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 ITPRIPL2Q3MIP1 535 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 SNX30Q5VWJ9 437 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 DDX42Q86XP3 938 aaKnown RBP eCLIP21.05■□□□□ 0.96
SFXN1-209ENST00000508290 C12orf29Q8N999 325 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 WHAMMQ8TF30 809 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 FAM3CQ92520 227 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 FBXO32Q969P5 355 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 CLDN23Q96B33 292 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 NT5C1BQ96P26 610 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 TWNKQ96RR1 684 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 KCNK16Q96T55 309 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 SRRTQ9BXP5 876 aaKnown RBP21.05■□□□□ 0.96
SFXN1-209ENST00000508290 FOXQ1Q9C009 403 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.05■□□□□ 0.962e-6■■■■■ 96.1
SFXN1-209ENST00000508290 FAM49BQ9NUQ9 324 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 KIAA1257Q9ULG3 409 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.05■□□□□ 0.96
SFXN1-209ENST00000508290 AFPP02771 609 aaKnown RBP21.04■□□□□ 0.96
SFXN1-209ENST00000508290 SLC7A9P82251 487 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 USP4Q13107 963 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 MTF1Q14872 753 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 SMYD5Q6GMV2 418 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 HEXIM2Q96MH2 286 aaKnown RBP21.04■□□□□ 0.96
SFXN1-209ENST00000508290 LRRC3BQ96PB8 259 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 SMOQ99835 787 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 FAM83CQ9BQN1 747 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 SMG9Q9H0W8 520 aaKnown RBP21.04■□□□□ 0.96
SFXN1-209ENST00000508290 LMBRD1Q9NUN5 540 aa21.04■□□□□ 0.96
SFXN1-209ENST00000508290 OAS1P00973 400 aaKnown RBP21.03■□□□□ 0.96
SFXN1-209ENST00000508290 ERCC5P28715 1186 aaPredicted RBP21.03■□□□□ 0.96
SFXN1-209ENST00000508290 MAP3K7CLP57077 242 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 ORC1Q13415 861 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 ZNF77Q15935 545 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 ARHGAP17Q68EM7 881 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 CLEC20AQ6ZU45 233 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 ARL14EPQ8N8R7 260 aaPredicted RBP21.03■□□□□ 0.96
SFXN1-209ENST00000508290 JAKMIP2Q96AA8 810 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 DUSP16Q9BY84 665 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 UBXN6Q9BZV1 441 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 CCL26Q9Y258 94 aa21.03■□□□□ 0.96
SFXN1-209ENST00000508290 C2orf78A6NCI8 922 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 LRRN2O75325 713 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 DCNP07585 359 aaKnown RBP21.02■□□□□ 0.96
SFXN1-209ENST00000508290 TARSP26639 723 aaKnown RBP21.02■□□□□ 0.96
SFXN1-209ENST00000508290 ADORA2BP29275 332 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 RAD23BP54727 409 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 GCNT1Q02742 428 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 KCNH2Q12809 1159 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 LRRC32Q14392 662 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 HECTD3Q5T447 861 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 FAM114A1Q8IWE2 563 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 ZMIZ2Q8NF64 920 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 TATDN2Q93075 761 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 ATP2A3Q93084 1043 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 FAM81BQ96LP2 452 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 TLR8Q9NR97 1041 aaKnown RBP21.02■□□□□ 0.96
SFXN1-209ENST00000508290 GKN1Q9NS71 199 aa21.02■□□□□ 0.96
SFXN1-209ENST00000508290 COL4A2P08572 1712 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SPECC1L-ADORA2AF8WAN1 911 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SLC9A3R1O14745 358 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-209ENST00000508290 ZDHHC11BP0C7U3 371 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 CTHP32929 405 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 IFNAR2P48551 515 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 PSEN1P49768 467 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 IFRD2Q12894 506 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-209ENST00000508290 RUNX3Q13761 415 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 ANGPT1Q15389 498 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 TPD52L1Q16890 204 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-209ENST00000508290 ZNF394Q53GI3 561 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 MAMSTRQ6ZN01 415 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 GPIHBP1Q8IV16 184 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 C1orf210Q8IVY1 113 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 CPA6Q8N4T0 437 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SLC4A11Q8NBS3 891 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SH3RF2Q8TEC5 729 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 OSCP1Q8WVF1 389 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SLC22A12Q96S37 553 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 CYP2S1Q96SQ9 504 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 ARID3AQ99856 593 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 SCML2Q9UQR0 700 aa21.01■□□□□ 0.95
SFXN1-209ENST00000508290 ABL1P00519 1130 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 PAEPP09466 180 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 CD72P21854 359 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 NR1H3Q13133 447 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 SGO2Q562F6 1265 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 DGKKQ5KSL6 1271 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 PPP1R26Q5T8A7 1209 aaPredicted RBP21■□□□□ 0.95
SFXN1-209ENST00000508290 TADA2BQ86TJ2 420 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 ZNF687Q8N1G0 1237 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 PPM1KQ8N3J5 372 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 SYNPOQ8N3V7 929 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 ANKRD52Q8NB46 1076 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 EHBP1Q8NDI1 1231 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 SCAMP5Q8TAC9 235 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 ATOH1Q92858 354 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms