RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 UBE2R2Q712K3 238 aaPredicted RBP8.6□□□□□ -1.03
PFDN1-202ENST00000507185 OR2W6PQ8NHA6 318 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 MRPL38Q96DV4 380 aaKnown RBP8.6□□□□□ -1.03
PFDN1-202ENST00000507185 LRRC37BQ96QE4 947 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 RANBP17Q9H2T7 1088 aaKnown RBP8.6□□□□□ -1.03
PFDN1-202ENST00000507185 HDAC6Q9UBN7 1215 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 MUTYHQ9UIF7 546 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 ZNF180Q9UJW8 692 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 DDX19BQ9UMR2 479 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 CHD7Q9P2D1 2997 aa8.6□□□□□ -1.03
PFDN1-202ENST00000507185 COL11A1P12107 1806 aaPredicted RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PRAMEF25A6NGN4 478 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 KCNK3O14649 394 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 CREB3O43889 395 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 DHX16O60231 1041 aaKnown RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 SELENOPP49908 381 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 CDSNQ15517 529 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 DGKDQ16760 1214 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 EPC2Q52LR7 807 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 ZNF618Q5T7W0 954 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 FAM102BQ5T8I3 360 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 SPRED1Q7Z699 444 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PALM2Q8IXS6 379 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 TCEAL8Q8IYN2 117 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 GIMAP8Q8ND71 665 aaPredicted RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 GNRHR2Q96P88 292 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PRRC2BQ5JSZ5 2229 aaKnown RBP8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PLIN4Q96Q06 1357 aa8.59□□□□□ -1.03
PFDN1-202ENST00000507185 PLA2G6O60733 806 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 CLASP2O75122 1294 aaKnown RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 CTNNB1P35222 781 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 TOP3AQ13472 1001 aaPredicted RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 KIAA0753Q2KHM9 967 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 NXNQ6DKJ4 435 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 ZCCHC8Q6NZY4 707 aaKnown RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 TSHZ1Q6ZSZ6 1077 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 SUGP1Q8IWZ8 645 aaKnown RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 KATNAL1Q9BW62 490 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 RHOBTB2Q9BYZ6 727 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 SEMA4AQ9H3S1 761 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 SMURF1Q9HCE7 757 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 IL17RBQ9NRM6 502 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 GALNT8Q9NY28 637 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 APOBEC2Q9Y235 224 aaKnown RBP8.58□□□□□ -1.04
PFDN1-202ENST00000507185 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
PFDN1-202ENST00000507185 ZNF891A8MT65 544 aaPredicted RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 RSPH10B2B2RC85 870 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 CCER2I3L3R5 266 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ABLIM3O94929 683 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 CXCL10P02778 98 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 C4BPAP04003 597 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 RSPH10BP0C881 870 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 GOLGA8HP0CJ92 632 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 TOP1P11387 765 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 AOAHP28039 575 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 SCNN1BP51168 640 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 RAC3P60763 192 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ARHGAP1Q07960 439 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 GPNMBQ14956 572 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 HS1BP3Q53T59 392 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ARHGEF16Q5VV41 709 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ABHD17CQ6PCB6 329 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ADHFE1Q8IWW8 467 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 DBF4BQ8NFT6 615 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 Q8TCH9 128 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 NEK9Q8TD19 979 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 JPH3Q8WXH2 748 aaPredicted RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 KAT2BQ92831 832 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 PABPC5Q96DU9 382 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 WWC2-AS2Q96NR7 200 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 TMEM47Q9BQJ4 181 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 IFIH1Q9BYX4 1025 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 CHMP4BQ9H444 224 aaKnown RBP8.57□□□□□ -1.04
PFDN1-202ENST00000507185 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
PFDN1-202ENST00000507185 MYO9BQ13459 2157 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 B4E1Z4 1266 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 PRKD3O94806 890 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 MYCLP12524 364 aaPredicted RBP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 ZSCAN20P17040 1043 aaPredicted RBP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 NDUFV1P49821 464 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 HLTFQ14527 1009 aaKnown RBP eCLIP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 STXBP2Q15833 593 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 TCTN3Q6NUS6 607 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 TAX1BP1Q86VP1 789 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 WDR48Q8TAF3 677 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 NSUN6Q8TEA1 469 aaKnown RBP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 SEPT8Q92599 483 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
PFDN1-202ENST00000507185 SPATA33Q96N06 139 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 TAAR1Q96RJ0 339 aa8.56□□□□□ -1.04
PFDN1-202ENST00000507185 CTAGE1Q96RT6 745 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms