RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 SPTBN4Q9H254 2564 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 C2orf78A6NCI8 922 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 ARSAP15289 507 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 EIF2DP41214 584 aaKnown RBP15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 CASP4P49662 377 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 GALK1P51570 392 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 VAMP7P51809 220 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 TAF10Q12962 218 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 SNX30Q5VWJ9 437 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 CEP68Q76N32 757 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 SV2AQ7L0J3 742 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 DGLUCYQ7Z3D6 616 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 CRYBG2Q8N1P7 616 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 RMDN1Q96DB5 314 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 SLC22A12Q96S37 553 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 DUSP9Q99956 384 aaKnown RBP15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 B3GNT5Q9BYG0 378 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 ZNF518BQ9C0D4 1074 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 FBXO44Q9H4M3 255 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 FAM124BQ9H5Z6 455 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 USP18Q9UMW8 372 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 WNT6Q9Y6F9 365 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
HMGCS1-203ENST00000507004 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 LEFTY2O00292 366 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 STX10O60499 249 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 RNF40O75150 1001 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 OAS1P00973 400 aaKnown RBP15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 NR2F2P24468 414 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 GTF2H1P32780 548 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 NDUFA8P51970 172 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 USP46P62068 366 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 DPYDQ12882 1025 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 BECN1Q14457 450 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 SYT13Q7L8C5 426 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 FAM35AQ86V20 835 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 C11orf74Q86VG3 221 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 FBXO32Q969P5 355 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 DPEP3Q9H4B8 488 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 SMYD3Q9H7B4 428 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 RMND1Q9NWS8 449 aa15.31■□□□□ 0.04
HMGCS1-203ENST00000507004 E2F8A0AVK6 867 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 FAM92AA1XBS5 289 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 OTOL1A6NHN0 477 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 HRO43593 1189 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 ADH1CP00326 375 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 ABL1P00519 1130 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 EGFP01133 1207 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 MBL2P11226 248 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 PIK3CAP42336 1068 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 EDRF1Q3B7T1 1238 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 HSF5Q4G112 596 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 HECTD3Q5T447 861 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 TTC16Q8NEE8 873 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 GAB3Q8WWW8 586 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 RTKNQ9BST9 563 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 IL37Q9NZH6 218 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 CDV3Q9UKY7 258 aaKnown RBP15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 NME7Q9Y5B8 376 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 CPQQ9Y646 472 aa15.3■□□□□ 0.04
HMGCS1-203ENST00000507004 GOLGA6L4A6NEF3 574 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 AP1G2O75843 785 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 ZNF202O95125 648 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 VNN1O95497 513 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CDH8P55286 799 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 ADAM9Q13443 819 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CSRP2Q16527 193 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 HEATR6Q6AI08 1181 aaKnown RBP15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 NUDT18Q6ZVK8 323 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 NETO1Q8TDF5 533 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CHFRQ96EP1 664 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 NT5C1AQ9BXI3 368 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 EBF1Q9UH73 591 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 HOOK1Q9UJC3 728 aaKnown RBP15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CFAP54Q96N23 3096 aa15.29■□□□□ 0.04
HMGCS1-203ENST00000507004 CLDN5O00501 218 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 TNFRSF10BO14763 440 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 AXIN1O15169 862 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 RPP40O75818 363 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 APBB3O95704 486 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 HLA-DRAP01903 254 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 FAM200BP0CF97 657 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms