RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 TULP2O00295 520 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 EPHB6O15197 1021 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 DCXO43602 365 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 RTN3O95197 1032 aaPredicted RBP19.21■□□□□ 0.67
NPHP4-210ENST00000506941 CAVIN2O95810 425 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 UCHL3P15374 230 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 YWHAQP27348 245 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 UBXN1Q04323 297 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 SYCP1Q15431 976 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 PKDCCQ504Y2 493 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 LRSAM1Q6UWE0 723 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 LCLAT1Q6UWP7 414 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 MTSS1LQ765P7 747 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 MAB21L3Q8N8X9 362 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 SMARCD2Q92925 531 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 RSPRY1Q96DX4 576 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 PLA2G2FQ9BZM2 168 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 TRPV4Q9HBA0 871 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 PNPLA8Q9NP80 782 aa19.21■□□□□ 0.67
NPHP4-210ENST00000506941 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.21■□□□□ 0.67
NPHP4-210ENST00000506941 FAM92AA1XBS5 289 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 C2orf78A6NCI8 922 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 PI4K2BG5E9Z4 385 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 FOXN3O00409 490 aaPredicted RBP19.2■□□□□ 0.66
NPHP4-210ENST00000506941 TEX33O43247 280 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 NARSO43776 548 aaKnown RBP19.2■□□□□ 0.66
NPHP4-210ENST00000506941 PRAMEF12O95522 483 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 USP8P40818 1118 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 VIPR2P41587 438 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 PGFP49763 221 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 BCAT1P54687 386 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 PDE4CQ08493 712 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 TDGQ13569 410 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 SLC44A3Q8N4M1 653 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 UBA3Q8TBC4 463 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 MRPS31Q92665 395 aaKnown RBP19.2■□□□□ 0.66
NPHP4-210ENST00000506941 FBXO32Q969P5 355 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 NXPE3Q969Y0 559 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 ERGIC2Q96RQ1 377 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 SLC22A12Q96S37 553 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 FAM207AQ9NSI2 230 aaPredicted RBP19.2■□□□□ 0.66
NPHP4-210ENST00000506941 EHD2Q9NZN4 543 aa19.2■□□□□ 0.66
NPHP4-210ENST00000506941 ZNF840PA6NDX5 716 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 CYP26A1O43174 497 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 ECI2O75521 394 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 DDX6P26196 483 aaKnown RBP eCLIP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 BST2Q10589 180 aaKnown RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 RAPGEF1Q13905 1077 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 DRAP1Q14919 205 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 CNGA2Q16280 664 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 PIGZQ86VD9 579 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 MON1AQ86VX9 555 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 ARID3BQ8IVW6 561 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 CMTM8Q8IZV2 173 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 ELSPBP1Q96BH3 223 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 NAP1L5Q96NT1 182 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 SLITRK1Q96PX8 696 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 SMG9Q9H0W8 520 aaKnown RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 EPHX3Q9H6B9 360 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 TRPC7Q9HCX4 862 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 RTN4Q9NQC3 1192 aaKnown RBP19.19■□□□□ 0.66
NPHP4-210ENST00000506941 COMMD8Q9NX08 183 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 TRPM5Q9NZQ8 1165 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 GMIPQ9P107 970 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 COL4A3Q01955 1670 aa19.19■□□□□ 0.66
NPHP4-210ENST00000506941 M0QYV0 167 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 XPO1O14980 1071 aaKnown RBP19.18■□□□□ 0.66
NPHP4-210ENST00000506941 CFHP08603 1231 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 RFX1P22670 979 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 WEE1P30291 646 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 GNA15P30679 374 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 CLCN1P35523 988 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 KIF11P52732 1056 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 ZXDAP98168 799 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 STILQ15468 1287 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 RAB41Q5JT25 222 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 VITQ6UXI7 678 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 FAM71AQ8IYT1 594 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 OVCA2Q8WZ82 227 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 LRRC3BQ96PB8 259 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 CYP2S1Q96SQ9 504 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 UBXN6Q9BZV1 441 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 ZFP14Q9HCL3 533 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 CHORDC1Q9UHD1 332 aaPredicted RBP19.18■□□□□ 0.66
NPHP4-210ENST00000506941 DUSP12Q9UNI6 340 aa19.18■□□□□ 0.66
NPHP4-210ENST00000506941 A0A1B0GTH6 734 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 SOBPA7XYQ1 873 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 F8VZ95 297 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 ZDHHC11BP0C7U3 371 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 SETSIPP0DME0 302 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 PLA2G4AP47712 749 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
NPHP4-210ENST00000506941 SMYD5Q6GMV2 418 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 ZNF606Q8WXB4 792 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 EDAQ92838 391 aa19.17■□□□□ 0.66
NPHP4-210ENST00000506941 SECISBP2LQ93073 1101 aaKnown RBP19.17■□□□□ 0.66
NPHP4-210ENST00000506941 FBXO44Q9H4M3 255 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms