RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 UBAP2LQ14157 1087 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 PLA2G4FQ68DD2 849 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 SLC39A4Q6P5W5 647 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 FBXL19Q6PCT2 694 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 B3GNT6Q6ZMB0 384 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 ACSF2Q96CM8 615 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 FAM84AQ96KN4 292 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 ZNF395Q9H8N7 513 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 XPO7Q9UIA9 1087 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 SDR42E2A6NKP2 422 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 TBL3Q12788 808 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 ACBD5Q5T8D3 534 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 ZNF516Q92618 1163 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 C10orf88Q9H8K7 445 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 SAE1Q9UBE0 346 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 HBS1LQ9Y450 684 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 C15orf38-AP3S2A0A0A6YYH1 394 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 ARHGAP42A6NI28 874 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 CASQ2O14958 399 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PEX1O43933 1283 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PFDN1O60925 122 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 SNNO75324 88 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PGM3O95394 542 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 C6orf222P0C671 652 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 SETSIPP0DME0 302 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 SSTR3P32745 418 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 ELK3P41970 407 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 RPL5P46777 297 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 MRPS5P82675 430 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 SLC25A3Q00325 362 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 BTKQ06187 659 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 CRY2Q49AN0 593 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PPP1R2P3Q6NXS1 205 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 KLC3Q6P597 504 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PGM2L1Q6PCE3 622 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 HHIPL2Q6UWX4 724 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 ARPINQ7Z6K5 226 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 SLC26A7Q8TE54 656 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 JADE3Q92613 823 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 AGBL1Q96MI9 1066 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 USP29Q9HBJ7 922 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 DDX56Q9NY93 547 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 DDTLA6NHG4 134 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 C3orf70A6NLC5 250 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 TTC36A6NLP5 189 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 LYPLA2O95372 231 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 TFAP2AP05549 437 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 KITP10721 976 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 GNA15P30679 374 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 NCOA4Q13772 614 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 CHI3L2Q15782 390 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 TTC39BQ5VTQ0 682 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 CRLF3Q8IUI8 442 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 DNAJC1Q96KC8 554 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 MXRA8Q9BRK3 442 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 C20orf27Q9GZN8 174 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 MARCOQ9UEW3 520 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-211ENST00000506690 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 C1QAP02745 245 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 MMP8P22894 467 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 OGDHQ02218 1023 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 WASHC5Q12768 1159 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 BRDTQ58F21 947 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 RBM44Q6ZP01 1051 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 RAB3IL1Q8TBN0 382 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 RILPQ96NA2 401 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 EBF4Q9BQW3 602 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 FRMD8P1Q9BZ68 369 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 TEX264Q9Y6I9 313 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 A0A0J9YVX5 310 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 TCRBV5S1A1TA0A578 114 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 TRIM49D1C9J1S8 452 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 DHX15O43143 795 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 DESP17661 470 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 ITGB5P18084 799 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 YWHABP31946 246 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 QARSP47897 775 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 FOLH1Q04609 750 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 WDR44Q5JSH3 913 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 SLC26A11Q86WA9 606 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 MARVELD2Q8N4S9 558 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 KIFC3Q9BVG8 833 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 RBM38Q9H0Z9 239 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 EFR3BQ9Y2G0 817 aa17.8■□□□□ 0.44
SQSTM1-211ENST00000506690 TTLL13PA6NNM8 815 aa17.79■□□□□ 0.44
SQSTM1-211ENST00000506690 SPAG6O75602 509 aa17.79■□□□□ 0.44
SQSTM1-211ENST00000506690 GDF11O95390 407 aa17.79■□□□□ 0.44
SQSTM1-211ENST00000506690 NPTX2P47972 431 aa17.79■□□□□ 0.44
SQSTM1-211ENST00000506690 HIRAP54198 1017 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-211ENST00000506690 TRIP10Q15642 601 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms